Query= MSMg01no191_j03.b1 MSMg01no191_j03.b1 CHROMAT_FILE:
MSMg01no191_j03.b1 PHD_FILE: MSMg01no191_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:14 2005
(186 letters)
>mm_chr18_61547073_61547658
Length = 586
Score = 317 bits (164), Expect = 2e-91
Identities = 179/184 (97%), Gaps = 2/184 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttccatttacagggtatggctgtggtccacctggggta-aagccctgggggct 62
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||
Sbjct: 386 ggaattcttccatttacagggtatggctgtggtccacctgggg-acaagccctggggcct 328
Query: 63 cccagatcctcataactcagggaagtgtccccattctctggacaacacagtaagtttgaa 122
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccctgatcctcataactcagggaagtgtccccattctctggacaacacagtaagtttgaa 268
Query: 123 gccaggacaggcctacacgagcccttttctaccctgataacctgcagtgtaacatcccca 182
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 267 gccaggacaggcctacacgagcccttttctaccctgaaaacctgcagtgtaacatcccca 208
Query: 183 agga 186
||||
Sbjct: 207 agga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 586
Length adjustment: 8
Effective length of query: 178
Effective length of database: 578
Effective search space: 102884
Effective search space used: 102884
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no191_j03.g1 MSMg01no191_j03.g1 CHROMAT_FILE:
MSMg01no191_j03.g1 PHD_FILE: MSMg01no191_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:14 2005
(280 letters)
>mm_chr18_61399846_61400525
Length = 680
Score = 542 bits (280), Expect = e-158
Identities = 280/280 (100%)
Strand = Plus / Plus
Query: 1 atcaccaaagccaaacctaggcctccactcagccacagagtcacaggagtggctgggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcaccaaagccaaacctaggcctccactcagccacagagtcacaggagtggctgggatt 260
Query: 61 gatcatgtaaagcatgggtgttgctgctgaggtggcttggtgggaaaaggtgactgagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcatgtaaagcatgggtgttgctgctgaggtggcttggtgggaaaaggtgactgagct 320
Query: 121 aaagcccgaggaccagagtttgatttccactacttaactctgtgagaggatagaatgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagcccgaggaccagagtttgatttccactacttaactctgtgagaggatagaatgtgc 380
Query: 181 tgcagggactcattatacacctctgtcctggaactctccatgcagaccgggctgtggcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcagggactcattatacacctctgtcctggaactctccatgcagaccgggctgtggcct 440
Query: 241 tgaacttgtctctgcccctcaagtgctatggttaatggac 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaacttgtctctgcccctcaagtgctatggttaatggac 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
