Query= MSMg01no192_b09.b1 MSMg01no192_b09.b1 CHROMAT_FILE:
MSMg01no192_b09.b1 PHD_FILE: MSMg01no192_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:00 2005
(411 letters)
>mm_chr18_36808041_36808851
Length = 811
Score = 775 bits (401), Expect = 0.0
Identities = 404/405 (99%)
Strand = Plus / Minus
Query: 5 gaattctttttattatgacatcaacttccaaaaacctggatcaatataaggtataaatgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gaattctttttattatgacatcaacttccaaaaacctggatcaatataaggtataaatgc 550
Query: 65 cttcctgttaggtacagaataaatagcttattttatgtaatttacatatagcaatttttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cttcctgttaggtacagaataaatagcttattttatgtaatttacatatagcaatttttg 490
Query: 125 catttaagcagcattaattaaaaagcattatttctgtaaagttagactgtattaggtaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 catttaagcagcattaattaaaaagcattatttctgtaaagttagactgtattaggtaca 430
Query: 185 aaataagtgcctattagcttggaaggtgagttttgacagccccatatttagttacaataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaataagtgcctattagcttggaaggtgagttttgacagccccatatttagttacaataa 370
Query: 245 tacttaatgacttaccaactggactagtggaaactctctgtgacggtggtctgaagccag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tacttaatgacttaccaactggactagtggaaactctctgtgacggtggtctgaagccag 310
Query: 305 gtgctttggagttgtcagggtgtacattttccaagtgtccaagtacagagttactcagga 364
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtgctttggagttgtcagggtgcacattttccaagtgtccaagtacagagttactcagga 250
Query: 365 aagctgactgaacagtgaaagaggcatctgcagcaactcttgagg 409
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aagctgactgaacagtgaaagaggcatctgcagcaactcttgagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_b09.g1 MSMg01no192_b09.g1 CHROMAT_FILE:
MSMg01no192_b09.g1 PHD_FILE: MSMg01no192_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:00 2005
(377 letters)
>mm_chr18_36770233_36771008
Length = 776
Score = 698 bits (361), Expect = 0.0
Identities = 373/377 (98%), Gaps = 1/377 (0%)
Strand = Plus / Plus
Query: 1 acttaggagctgtcctggccttccaccccggaaatgttttcctgtattatcttcctgacc 60
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||
Sbjct: 201 acttaggagctgtcctggccttccaccccggaagtgttttcttgtattatcttccttacc 260
Query: 61 ttggccatcggggaaataggacattacatactgaattgggtccatgtctgtccagttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggccatcggggaaataggacattacatactgaattgggtccatgtctgtccagttgga 320
Query: 121 tgctttattgtaatgatggacatctttataaacatcttaatctcaacacataatttttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctttattgtaatgatggacatctttataaacatcttaatctcaacacataatttttgg 380
Query: 181 aataaaacttggaaagattaaaaaaaaaacaatttcattacttaggtaaatgtagtaaga 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 aataaaacttggaaagattaaaaaaaaa-caatttcattacttaggtaaatgtagtaaga 439
Query: 241 gtttgtacactaaccatactaagactaccaatcatacaagcgcgttcagttgggtgaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtttgtacactaaccatactaagactaccaatcatacaagcgcgttcagttgggtgaagt 499
Query: 301 ttgataataagtccttgttagaagctgttttatcactcattcttgtatctgccaaacttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttgataataagtccttgttagaagctgttttatcactcattcttgtatctgccaaacttt 559
Query: 361 gtagaggagaacagtga 377
|||||||||||||||||
Sbjct: 560 gtagaggagaacagtga 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 776
Length adjustment: 9
Effective length of query: 368
Effective length of database: 767
Effective search space: 282256
Effective search space used: 282256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
