GGGATGTTTCCCACGCCGGGCGGAATTCCAAGCAGCATTGCAGTTACTTG
CTTCTGGTTTTGATAATTCTAGAAATATGTTTACATTTTTAAAAACTACC
GCACAGGGTAATTAATATGAGTATATAAGAACAATTATTTCTATTTCATC
TATTTCAAATATTTAATCGTAACAATAATCTTATAACAGTGGACATTGAC
TCTAAAGACAACTTCCCCTTGATGCCTCTTCCTTTCCTTTATCTTTTCCT
AAACCTGTTTAGCTCTTTCATGTTATGAGAACTTTTATAAAAGACTTANG
ATCCATACACACACACACACACACAGGAATTCATTATTTATTACCGCCTC
CCCTTTCAACTCAGAAGGGTATCTCTATAGATAAACATTACAGAAACTCC
AACTTTACTCCATTCATTTTCACTCTTTTGGGTCAAATCAAGCAATGCCT
CTTGGACTTCTTCTCCCTACATGACAAGAAATTTGTGTAAATCTTTGCTT
TCCATAATCTAATGAAGTCTCCTTCCATAGTGCTAATGGCATATTGTGAC
AAAGTCTTCTGCGCAAGCCAATAAGAAGGTGGAAGTTGAGAAGAAGTTGC
ATTTTACTCAAGAGCTTAACTGTTGCTTGTGGAACTCATTTTATTTGTTA
CATAAGTTCCAGAAGCAGCTGATGCAAATAAGTATTTCCTGGTAGTGAAT
ACTGGATACAGCTGCA

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGGACTGCTGAATCCAATCCATTT
CTTTCTAATGCACGATTTCAAAGTTCTAGCTAAAAATTCAAGTTTCATGA
GGGAAGATCCTTTAAGCCTTTCAAAAATATTCGATTACTAAATTAACGTG
AGTACTGTCAGCAAATACAGACTCAGGAAGACTGACTCAACGACAGTAAA
AATCATGTGGAATGCTTCCTGGATAGTTTGGATTTTACCTTTCCCATTTC
ACAGATTAAAGCACTATAATGCAATGATTAAAAGATCTATCTGAGTCTTA
CAATTTCAGATTGTTTAGAACTTGAAAAGAGCCCAAAAGTTATTGCCCTC
TAACTCTCGGCAGTCCAGCCAATGTCTAGAAGATGTAAGAGTTAGTATTC
TAAGTCCATGCTATTATTATTGTTACACAGGGCTCAAATTTAAGTGTCAC
AACAGATATATCAAATTGCCAATGTATGAGAAGATCTCAACATTGTATTG
GTTCATTTCTTCCCACTTTTGATGAGACAATAATAATTTTGATAACAAGT
ACATTCTTCAATACATGGCTTTTAAGGGATGGTTTCCTTTCCTAGCCCTG
TTACTACAGAACTGTATTCAGAGGCACACTGTTCATAGTCATACAGACAA
GCTAGAAAGCCAGAACAATTGGAGAATGAC

Query= MSMg01no194_k15.b1 MSMg01no194_k15.b1 CHROMAT_FILE:
MSMg01no194_k15.b1 PHD_FILE: MSMg01no194_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:36 2005
         (280 letters)



>mm_chr18_72084769_72085448
          Length = 680

 Score =  511 bits (264), Expect = e-149
 Identities = 276/280 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccctttcaactcagaagggtatctctatagataaacattacagaaactccaactttact 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 cccctttcaactcagaagggtatctctatagataaaaattacagaaactccaactttact 260

                                                                       
Query: 61  ccattcattttcactcttttgggtcaaatcaagcaatgcctcttggacttcttctcccta 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccattcattttcagtcttttgggtcaaatcaagcaatgcctcttggacttcttctcccta 320

                                                                       
Query: 121 catgacaagaaatttgtgtaaatctttgctttccataatctaatgaagtctccttccata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgacaagaaatttgtgtaaatctttgctttccataatctaatgaagtctccttccata 380

                                                                       
Query: 181 gtgctaatggcatattgtgacaaagtcttctgcgcaagccaataagaaggtggaagttga 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgctaatggcatattgtgacagagtcttctgcgcaagccaataagaaggtggaagttga 440

                                                   
Query: 241 gaagaagttgcattttactcaagagcttaactgttgcttg 280
           ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 gaagaagttgcattttactcaagagtttaactgttgcttg 480


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space:   181841
Effective search space used:   181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no194_k15.g1 MSMg01no194_k15.g1 CHROMAT_FILE:
MSMg01no194_k15.g1 PHD_FILE: MSMg01no194_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:36 2005
         (648 letters)



>mm_chr18_72198078_72199125
          Length = 1048

 Score = 1230 bits (636), Expect = 0.0
 Identities = 645/648 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttggactgctgaatccaatccatttctttctaatgcacgatttcaaagttctagctaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tttggactgctgaatccaatccatttctttctaatgcacgatttcaaagttctagctaaa 789

                                                                       
Query: 61  aattcaagtttcatgagggaagatcctttaagcctttcaaaaatattcgattactaaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 aattcaagtttcatgagggaagatcctttaagcctttcaaaaatattcgattactaaatt 729

                                                                       
Query: 121 aacgtgagtactgtcagcaaatacagactcaggaagactgactcaacgacagtaaaaatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aacgtgagtactgtcagcaaatacagactcaggaagactgactcaacgacagtaaaaatc 669

                                                                       
Query: 181 atgtggaatgcttcctggatagtttggattttacctttcccatttcacagattaaagcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atgtggaatgcttcctggatagtttggattttacctttcccatttcacagattaaagcac 609

                                                                       
Query: 241 tataatgcaatgattaaaagatctatctgagtcttacaatttcagattgtttagaacttg 300
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 608 tataatgcaatgattaaaagatctacctgagtcttacaatttcagattgtttagaacttg 549

                                                                       
Query: 301 aaaagagcccaaaagttattgccctctaactctcggcagtccagccaatgtctagaagat 360
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 548 aaaagagcccaaaagttattgccctctaactctcggcagtccagccaaagtctagaagat 489

                                                                       
Query: 361 gtaagagttagtattctaagtccatgctattattattgttacacagggctcaaatttaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtaagagttagtattctaagtccatgctattattattgttacacagggctcaaatttaag 429

                                                                       
Query: 421 tgtcacaacagatatatcaaattgccaatgtatgagaagatctcaacattgtattggttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgtcacaacagatatatcaaattgccaatgtatgagaagatctcaacattgtattggttc 369

                                                                       
Query: 481 atttcttcccacttttgatgagacaataataattttgataacaagtacattcttcaatac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atttcttcccacttttgatgagacaataataattttgataacaagtacattcttcaatac 309

                                                                       
Query: 541 atggcttttaagggatggtttcctttcctagccctgttactacagaactgtattcagagg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atggcttttaagggatggtttcctttcctagccctgttactacagaactgtattcagagg 249

                                                           
Query: 601 cacactgttcatagtcatacagacaagctagaaagccagaacaattgg 648
           ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 248 cacactgttcatagtcatacagacaagctagaaagccagcacaattgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)