TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATTTTGCCAACGTTAATTAATTCTAAGCTGCTTGCAAGTCTGTGG
AGTGGACAAAGCCATACAACAAAGTCACAAACAACAGACCCAAACACACA
GTTTTCAAAAGCTTCAAATGTTTCTAAAATGTAAATAAAATCATTCTCAC
ACAATGAACATACTTGCAGTAACACATAGACTGGGGAAGCGTCCCAAAGT
GAGGGGAAAGAGTCATTCTGAGACCCATCTAAAGATCCATAGGAAGAGAG
GAGGTTCCAGAACGGAGGAATTTCTTAGCTACATTGCTAATGCCATTTCA
GAATACTCTGCCTGTTAAATTCACTTTTAAAATATGAAATTAGAAAGCCC
TGTGCTAGTGGATTCTATTAATAATGAGCAGAGAGAAAATGGAACATGTG
CCCTGCAGCTCAGGTGAAAAGACATAATTAAAAATACTGCACTGGAAAGT
GATTTCTACTTCCCAGATGGCATCTGGCTTCCACACACTTGCAAACGGCC
AGATACAAAGCAACCCACACTTTCAATTAAACTCTTTCCTATTTGTAACA
AATATAGTTATTTATCACTAATGGAGGCACTCCAGTGGAAACGCTGAGTA
AATGGAGAAAAAAGGAATTGATTGCCAACTTTTCTCTTTATGGTTAACTG
TACAAACATGAAATAAATCCAAAGAAATGAAAACTGTCTCAGGT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTA
TTTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTAT
ATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTT
TCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTT
GCAGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTA
CAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATA
TCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGG
TTTTATGTGAAGTTCCTTGACCCACTTAGATTTGACCTTAGTACAAGGAG
ATAAGTATGGATCGATTCGCATTCTTCTACAGGATAACAACCAGTTGTGC
CAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGC
TCCCTTGTCGAAGATCAAGTGACTATAGGTGTGTGGGCTCTTTTCTGGGT
CTTCCATTTCTATTCCTTGGTCTACTTGTCAGCTCCCTATACCTGTACTA
TGCAGCCACACTGCGTATGGCTGTTCTCATAGTTCTATTTGTTATGTTAG
AGTATTTTATTTCTCCCTATCTCTTCCCTGTAAGTCACACCG

Query= MSMg01no194_m17.b1 MSMg01no194_m17.b1 CHROMAT_FILE:
MSMg01no194_m17.b1 PHD_FILE: MSMg01no194_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:47 2005
         (700 letters)



>mm_chr18_23249648_23250747
          Length = 1100

 Score = 1307 bits (676), Expect = 0.0
 Identities = 691/696 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaattttgccaacgttaattaattctaagctgcttgcaagtctgtggagtggaca 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaattttgccaaggttaattaattctaagctgcttgcaagtctgtggagtggaca 264

                                                                       
Query: 65  aagccatacaacaaagtcacaaacaacagacccaaacacacagttttcaaaagcttcaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagccatacaacaaagtcacaaacaacagacccaaacacacagttttcaaaagcttcaaa 324

                                                                       
Query: 125 tgtttctaaaatgtaaataaaatcattctcacacaatgaacatacttgcagtaacacata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtttctaaaatgtaaataaaatcattctcacacaatgaacatacttgcagtaacacata 384

                                                                       
Query: 185 gactggggaagcgtcccaaagtgaggggaaagagtcattctgagacccatctaaagatcc 244
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aactggggaagcatcccaaagtgaggggaaagagtcattctgagacccatctaaagatcc 444

                                                                       
Query: 245 ataggaagagaggaggttccagaacggaggaatttcttagctacattgctaatgccattt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ataggaagagaggaggttccagaacggaggaatttcttagctacattgctaatgccattt 504

                                                                       
Query: 305 cagaatactctgcctgttaaattcacttttaaaatatgaaattagaaagccctgtgctag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagaatactctgcctgttaaattcacttttaaaatatgaaattagaaagccctgtgctag 564

                                                                       
Query: 365 tggattctattaataatgagcagagagaaaatggaacatgtgccctgcagctcaggtgaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggattctattaataatgagcagagagaaaatggaacatgtgccctgcagctcaggtgaa 624

                                                                       
Query: 425 aagacataattaaaaatactgcactggaaagtgatttctacttcccagatggcatctggc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagacataattaaaaatactgcactggaaagtgatttctacttcccagatggcatctggc 684

                                                                       
Query: 485 ttccacacacttgcaaacggccagatacaaagcaacccacactttcaattaaactctttc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttccacacacttgcaaacggccagatacaaagcaacccacactttcaattaaactctttc 744

                                                                       
Query: 545 ctatttgtaacaaatatagttatttatcactaatggaggcactccagtggaaacgctgag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctatttgtaacaaatatagttatttatcactaatggaggcactccagtggaaacgctgag 804

                                                                       
Query: 605 taaatggagaaaaaaggaattgattgccaacttttctctttatggttaactgtacaaaca 664
           |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 805 taaatggagaaaaagggaattgattgccaacttttctctttatggttaagtgtacaaaca 864

                                               
Query: 665 tgaaataaatccaaagaaatgaaaactgtctcaggt 700
           ||||||||||||||||||||||||||||||||||||
Sbjct: 865 tgaaataaatccaaagaaatgaaaactgtctcaggt 900


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space:   752100
Effective search space used:   752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)