Query= MSMg01no197_p05.b1 MSMg01no197_p05.b1 CHROMAT_FILE:
MSMg01no197_p05.b1 PHD_FILE: MSMg01no197_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:01 2005
(323 letters)
>mm_chr18_55569634_55570357
Length = 724
Score = 567 bits (293), Expect = e-166
Identities = 311/317 (98%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 5 gaattcagag-aaaaaaatgaaaatttttctgtgttcttatccttttgttttaagttttg 63
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaattcagagaaaaaaaatgaaaatttttctgtgttcttatccttttgttttaagttttg 462
Query: 64 gatctacattcttaactactatattaaaaatatgtggaaatgccatgcacttttgaggct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gatctacattcttaactactatattaaaaatatgtggaaatgccatgcacttttgaggct 402
Query: 124 tatgggacaaaacatatttagattgttgtgggaacatgactgaagattggggttgagagg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 401 tatgggacaaaacatatttagattgttgtgggaacatgactgaagattgggggtgagagg 342
Query: 184 caacaaagtcatgaggcgaatcccaggaatcagactccagagtccagcatcagggtgcat 243
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 341 caacaaagtcatgaggcaaatcccaggaatcagactccagagtcctgcatcagggtgcat 282
Query: 244 atctaagtttatagtccagcccataagctatatacagtatttgagccaatcccaagcccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atctaagtttatagtccagcccataagctatatacagtatttgagccaatcccaagcccc 222
Query: 304 taacaccttgaccaata 320
|| |||||||||||||
Sbjct: 221 aaataccttgaccaata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_p05.g1 MSMg01no197_p05.g1 CHROMAT_FILE:
MSMg01no197_p05.g1 PHD_FILE: MSMg01no197_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:01 2005
(641 letters)
>mm_chr18_55425767_55426807
Length = 1041
Score = 1207 bits (624), Expect = 0.0
Identities = 633/636 (99%)
Strand = Plus / Plus
Query: 6 caagcatgtttgctcagggcaacagctcagaccggttggaacctgtgccactggtcaggt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 caagcatgtttgctcagggcaacagctcagaccggttggaacctgtgccactggtcaggt 265
Query: 66 ggagttcctgggtacctggatcccgctggtatcagttactcccagtgttggggcagatgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggagttcctgggtacctggatcccgctggtatcagttactcccagtgttggggcagatgt 325
Query: 126 tgtgtcctcctcatctctgatcctatgaacctgggagtgttaaagcttttgggagtgggt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgtgtcctcctcatctctgatcctatgaacctgggagtgttaaagcttttgggagtgggt 385
Query: 186 cttcctctgggtgttgaataaaacaagtttttaaaacaaatttttcaggaaattaattca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cttcctctgggtgttgaataaaacaagtttttaaaacaaatttttcaggaaattaattca 445
Query: 246 gtggccactctctgtcttctatttaatatttattgttatctatttggcctaaagaatttg 305
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 446 gtggccactctctgtcttctatttaatatttattgttatctatttgggctaaagaatttg 505
Query: 306 atacataagtaatgatggtacatttgtcctgaatccacaccacaggaaaagagacatctt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atacataagtaatgatggtacatttgtcctgaatccacaccacaggaaaagagacatctt 565
Query: 366 tcaattactcaatacaatatttctcacggtcgaaactatattttgttatgttatcactta 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tcaattactcaatacaatatttctcacggtcgaaactatattttgttatgttatcactta 625
Query: 426 attttgtctttctatatttgacccatttgacttccctaagatcagttttgaaaaaaccaa 485
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 attttgtctttctatagttgacccatttgacttccctaagatcagttttgaaaaaaccaa 685
Query: 486 tagaccaaataaaatttgggctgatgtcctaatggaggctgggcatgacgtcacactcct 545
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tagaccaaataaaatttggggtgatgtcctaatggaggctgggcatgacgtcacactcct 745
Query: 546 tgggtgccttcttgcctttctcaacttttcaacaccctgggaagaatgttggcagtgaaa 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tgggtgccttcttgcctttctcaacttttcaacaccctgggaagaatgttggcagtgaaa 805
Query: 606 tcagacttgatttcctactgcctatactttcctaaa 641
||||||||||||||||||||||||||||||||||||
Sbjct: 806 tcagacttgatttcctactgcctatactttcctaaa 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
