Query= MSMg01no199_p12.b1 MSMg01no199_p12.b1 CHROMAT_FILE:
MSMg01no199_p12.b1 PHD_FILE: MSMg01no199_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:43 2005
(482 letters)
>mm_chr18_4602204_4603087
Length = 884
Score = 897 bits (464), Expect = 0.0
Identities = 476/480 (99%), Gaps = 2/480 (0%)
Strand = Plus / Minus
Query: 5 gaattctatttcctgacacttccacatctttccaaaacttctctagtctctgagatgacg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaattctatttcctgacacttccacatctttccaaaacttctctagtctctgagatgacg 625
Query: 65 catattctcttaaagcaccatcccaaagttcttactgtccaataatgcattgtcacgaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 catattctcttaaagcaccatcccaaagttcttactgtccaataatgcattgtcacgaag 565
Query: 125 cctcagcttgaaattccacccacatctctcttctccattccttttacctcacagccttgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctcagcttgaaattccacccacatctctcttctccattccttttacctcacagccttgg 505
Query: 185 aattttcccgtttccctgaaagttaagcccagagagctcctgttggcaggctggcgtgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aattttcccgtttccctgaaagttaagcccagagagctcctgttggcaggctggcgtgca 445
Query: 245 gctgtggccctgtccttggcaatgttactgtcttcctgtttttgctgcctcccatggtcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctgtggccctgtccttggcaatgttactgtcttcctgtttttgctgcctcccatggtcc 385
Query: 305 tgtccttggcagtgttgctgccttcgtgcctccttcacttgcgcttcctgggagcccgtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtccttggcagtgttgctgccttcgtgcctccttcacttgcgcttcctgggagcccgtg 325
Query: 365 acctccacaagtactttatctttggcctgtccgtagtcttagaaactcttaattttttt- 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acctccacaagtactttatctttggcctgtccgtagtcttagaaactcttaatttttttt 265
Query: 424 cctttttttttcccc-ctttcttcttctaaatttctttgttaaagaaatttctttgaaaa 482
||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 ccttttttttttccctctttcttcctctaaatttctttgttaaagaaatttctttgaaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 884
Length adjustment: 10
Effective length of query: 472
Effective length of database: 874
Effective search space: 412528
Effective search space used: 412528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_p12.g1 MSMg01no199_p12.g1 CHROMAT_FILE:
MSMg01no199_p12.g1 PHD_FILE: MSMg01no199_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:43 2005
(139 letters)
>mm_chr18_4558013_4558551
Length = 539
Score = 269 bits (139), Expect = 5e-77
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 1 cttcacattattctggttcagtgagaacactaggtcctttgttcccaacttttaaaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcacattattctggttcagtgagaacactaggtcctttgttcccaacttttaaaatga 260
Query: 61 tgcattttaaaagttcaacttaaaacaatctttaaaacaacagtatgtgtgtttgtgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcattttaaaagttcaacttaaaacaatctttaaaacaacagtatgtgtgtttgtgagg 320
Query: 121 gggcggcagggtgttgcac 139
|||||||||||||||||||
Sbjct: 321 gggcggcagggtgttgcac 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 539
Length adjustment: 8
Effective length of query: 131
Effective length of database: 531
Effective search space: 69561
Effective search space used: 69561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
