Query= MSMg01no201_f15.b1 MSMg01no201_f15.b1 CHROMAT_FILE:
MSMg01no201_f15.b1 PHD_FILE: MSMg01no201_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:27 2005
(621 letters)
>mm_chr18_72198722_72199742
Length = 1021
Score = 1180 bits (610), Expect = 0.0
Identities = 616/618 (99%), Gaps = 2/618 (0%)
Strand = Plus / Plus
Query: 5 gaattcacggtgctctaacgaaagcaaatgtgaacatcttcggaaaggctgcatgactga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacggtgctctaacgaaagcaaatgtgaacatcttcggaaaggctgcatgactga 264
Query: 65 attcaggccagtgcgctggaagtgtgcgcatgcgcagaggtggcactcgctgagcgtcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attcaggccagtgcgctggaagtgtgcgcatgcgcagaggtggcactcgctgagcgtcat 324
Query: 125 ttgtttcctggctatgtgagttcttattaggatgaatttttagattaaaattttaaatag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtttcctggctatgtgagttcttattaggatgaatttttagattaaaattttaaatag 384
Query: 185 cttaagtcagtgaagcattgcacaaacacaaatataaatggggcattggagaatacaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttaagtcagtgaagcattgcacaaacacaaatataaatggggcattggagaatacaaac 444
Query: 245 gagccttctcaacactgggttaagagattggcttcagaacccctggatgcaatatggtat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagccttctcaacactgggttaagagattggcttcagaacccctggatgcaatatggtat 504
Query: 305 agtcctgcaccagacagggtcctagctagattcctgtgagcactcacatgactgggccat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtcctgcaccagacagggtcctagctagattcctgtgagcactcacatgactgggccat 564
Query: 365 tttttccctttatacaaggccccgggagataagattgtgatactgtggctcataatgttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttttccctttatacaaggccccgggagataagattgtgatactgtggctcataatgttc 624
Query: 425 tacaaaggtgagtgggttattttttaaaccccaaatgagggtcgattaatctgtagtgct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tacaaaggtgagtgggttattttttaaaccccaaatgagggtcgattaatctgtagtgct 684
Query: 485 gtgaagattaaaactacccagtgctatcctaacatgtcactgaatcgcatctgtttctgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtgaagattaaaactacccagtgctatcctaacatgtcactgaatcgcatctgtttctgc 744
Query: 545 tatacttctttatttattattctggtggtggagaaggtggatacatcagatttggacaa- 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tatacttctttatttattattctggtggtggagaaggtggatacatcagatttggacaaa 804
Query: 604 ctgaagaaatgctagaca 621
| ||||||||||||||||
Sbjct: 805 c-gaagaaatgctagaca 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_f15.g1 MSMg01no201_f15.g1 CHROMAT_FILE:
MSMg01no201_f15.g1 PHD_FILE: MSMg01no201_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:27 2005
(288 letters)
>mm_chr18_72246859_72247549
Length = 691
Score = 470 bits (243), Expect = e-137
Identities = 278/290 (95%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 1 tccctgatgttgt-ncaaggctcagattccccagcaaatgtttc-accacttctcatact 58
||||||||||||| |||||| |||||||||||||||||||||| | |||||||| |||
Sbjct: 490 tccctgatgttgtagcaaggcgcagattccccagcaaatgtttcaagtacttctcagact 431
Query: 59 gagagtcagtgtgacatatttcaataagacatgaattcagacacatacacacacacagat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gagagtcagtgtgacatatttcaataagacatgaattcagacacatacacacacacagat 371
Query: 119 tgagaaatattacttgcaagtgtaaataaatataaagatatgttgcttttccattcctga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgagaaatattacttgcaagtgtaaataaatataaagatatgttgcttttccattcctga 311
Query: 179 cagagaggaatatttgattcatatgtttaatatgctttgccttttacaggggaagaaact 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cagagaggaatatttgattcatatgtttaatatgctttgccttttacaggggaagaaact 251
Query: 239 -tggtaatgttactcctcacaccaagaaaaattttaaacaatttttttat 287
|| |||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 250 aagggaatgttactcctcacaccaagaaaaattttaaacaagtttcttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 691
Length adjustment: 9
Effective length of query: 279
Effective length of database: 682
Effective search space: 190278
Effective search space used: 190278
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
