CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGACCCTGCTGCAGCAGAATAAGAAAAGAAGATATGAGTGGAGAGA
AAGAGGAAAGCCAGTATCCTCGCTTTTGTTCCTTTAGTCTGTGACATTCT
GCATATTACCAGCATCTTCTCTTGGCCATCAGGTATCTTCAAAGGACATA
GCAGAAATGGCTCTCTGAGGCGTCCCAGTCTACTGTCCCTCGGGATGAGG
ATACAGCCATCATTACATAATTTCAACATATCTGAAAAACTTCTTGGATT
TCATCACCATCTCCCGTCTCACATTTCTGATCTCCATTTGGCAAAAATAC
AAGAGATTCCATACCTCCAGCACCCATCTCCTGTATCCTTATGTAATGTT
TAAGCAGAACACATTTACAAAAGTGCCAGTCAGTGAATTTCCAGTGAGCA
CATCCAAGTCGCCAGCTCAGATAGAAGAATAAAGGTCACTTGTGGTCCAG
AAGTCTCCACTGGTCCCTCCTCACTCACACTTTCCTCACCACAGATAGAT
CTCTAAGGCTGTAAGTCAGTGTTCCTGTCTTAAGCTTACAACGTATAGCT
TTCTTCACTCGATCATACGTCTATGAGATGCATCTATGTTCCATGAATGT
ACAGCGCATCCACTTTCAGCATTATATTCTTTCAATTGAATACACATAGT
TAACCATGATCATTAAAAAC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTAGTCTACGATGATGATGTTTTC
CATCCTCCCGAAGCAACTGCCCTGGTAGAAAGATGGAATGGCCTTTTGAA
GCTCAGTTACAGTGCCAATTAGGTGGCAGCAGCATGGAGGGCTGGGGCAG
AGTTCTTCAGAAGGCAGTATATGCTTTTAATCAGCGTCCGATATATGGTA
CAGCTCTCCCACAACCAGGATCCATGGGTCCGGGAATCAAGGGGTGGAAA
AGGGAAATAGTTCCACTCTCTATCACTCCTAGTGACCCTCTAGGAAAATT
TTTGCTTCCTGTCCCTACAACCCTAGATTCTGCTGGCCTAGAAGTTTTTG
GTTCCAGAGGGTACCCCGCTCCTACCAGGAGCCACAACAAACATTCCATT
GAACTGGAAGCTCAGAATTCTCCCTGGTCATTTTGGGCTTCCAATGCCCT
TACACCAACAGGTTAAGAGAGGAATAACAGTTAGGAGGGGCGTTAGATCC
TGATTATCATGTGGACCTTGTATTGCCTCTCCCCCTGCTGTTGTCCATCT
TTATTTCCGGATTGTAACGGTCGCTACTTTGTTTTCGCTTTGTTTTCTTC
TCCTCTGTTTTTTTTCTCTGTTCTTTTTCCCCTCGTATGCCCATCAGTCT
GTCTAGTATGTTTTATTTT

Query= MSMg01no202_p10.b1 MSMg01no202_p10.b1 CHROMAT_FILE:
MSMg01no202_p10.b1 PHD_FILE: MSMg01no202_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:58 2005
         (676 letters)



>mm_chr18_24891652_24892730
          Length = 1079

 Score = 1197 bits (619), Expect = 0.0
 Identities = 660/675 (97%), Gaps = 3/675 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgaccctgctgcagcagaataagaaaagaagatatgagtggagagaaagaggaa 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gaattctgaccctgttgcagcagaataagaaaagaagatatgagtggagagaaagaggaa 820

                                                                       
Query: 65  agccagtatcctcgcttttgttcctttagtctgtgacattctgcatattaccagcatctt 124
           |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 agccagcatcctcacttttgttcctttagtctgtgacattctgcatattaccagcatctt 760

                                                                       
Query: 125 ctcttggccatcaggtatcttcaaaggacatagcagaaatggctctctgaggcgtcccag 184
           |||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||
Sbjct: 759 ctcttggccatcaggtatctcccaaggacatagcagaaatggctctctggggcgtcccag 700

                                                                       
Query: 185 tctactgtccctcgggatgaggatacagccatcattacataatttcaacatatctgaaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tctactgtccctcgggatgaggatacagccatcattacataatttcaacatatctgaaaa 640

                                                                       
Query: 245 acttcttggatttcatcaccatctcccgtctcacatttctgatctccatttggcaaaaat 304
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 639 acttcttggatttcatcaccatctcccatctcacatttctgatctccatttggcaaaaat 580

                                                                       
Query: 305 acaagagattccatacctccagcacccatctcctgtatccttatgtaatgtttaagcaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 acaagagattccatacctccagcacccatctcctgtatccttatgtaatgtttaagcaga 520

                                                                       
Query: 365 acacatttacaaaagtgccagtcagtgaatttccagtgagcacatccaagtcgccagctc 424
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 acacatttagaaaagtgccagtcagtgaatttccagtgagcacatccaagtcgccagctc 460

                                                                       
Query: 425 agatagaagaataaaggtcacttgtggtccagaagtctccactggtccctcctcactcac 484
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 459 agatagaagaataaaggtcacttgtggtccagaagtctccaccggtccctcctcactcac 400

                                                                       
Query: 485 actttcctcaccacagatagatctctaaggctgtaagtcagtgttcctgtcttaagctta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 actttcctcaccacagatagatctctaaggctgtaagtcagtgttcctgtcttaagctta 340

                                                                       
Query: 545 caacgtatagctttcttcactcgatcatacgtctatgagatgcatctatgttccatgaat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caacgtatagctttcttcactcgatcatacgtctatgagatgcatctatgttccatgaat 280

                                                                       
Query: 605 gtacagcgcatccactttcagcattat---attctttcaattgaatacacatagttaacc 661
           |||||| ||||||||||||||||||||   ||||||||||||||||||||| ||||||||
Sbjct: 279 gtacagtgcatccactttcagcattattatattctttcaattgaatacacagagttaacc 220

                          
Query: 662 atgatcattaaaaac 676
           ||||||||| |||||
Sbjct: 219 atgatcattgaaaac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1079
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1069
Effective search space:   711954
Effective search space used:   711954
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)