Query= MSMg01no203_n07.b1 MSMg01no203_n07.b1 CHROMAT_FILE:
MSMg01no203_n07.b1 PHD_FILE: MSMg01no203_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:08 2005
(371 letters)
>mm_chr18_61968424_61969190
Length = 767
Score = 611 bits (316), Expect = e-179
Identities = 352/366 (96%), Gaps = 4/366 (1%)
Strand = Plus / Plus
Query: 5 gaattcagatcagtgcttatggtatatactggcacggtggaaacatttctcacttacaaa 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagatcaatgcttatggtatatactggcacggtggaaacatttctcacttacaaa 264
Query: 65 gaaacatggcttcacgctcaaagactctggctgatgcgaagatggggcctcaaacagtgt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaacatggcttcatgctcaaagactctggctgatgcgaagatggggcctcaaacagtgt 324
Query: 125 cacttccagttagtcagtttcttactgttaaatctaaataccaccttccctctccctccc 184
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 cacttccagtt----agtttcttactgttaaatctaaataccacattccctctccctccc 380
Query: 185 cgttcttagtacctggcagggaacagacactcagggatatctgttgcatagatgtagctg 244
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 381 cgttcttagtacctggcagggaacagacacttagggatatctgttgcacagatgtagctg 440
Query: 245 ggatatatatgtatgtatgcatgcatgcatgcatgactatatatgtatttacgtattgtg 304
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 ggatatgtatgtatgtatgcatgcatgcatgcatgactatatatgtatttacatattgtg 500
Query: 305 ctagtgatggaggatgtggacctcacacatgctaagcacacacctttccactaagttaca 364
|| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ctggtgatggaggatggggacctcacacatgctaagcacacccctttccactaagttaca 560
Query: 365 tcccta 370
||||||
Sbjct: 561 tcccta 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 767
Length adjustment: 9
Effective length of query: 362
Effective length of database: 758
Effective search space: 274396
Effective search space used: 274396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no203_n07.g1 MSMg01no203_n07.g1 CHROMAT_FILE:
MSMg01no203_n07.g1 PHD_FILE: MSMg01no203_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:08 2005
(289 letters)
>mm_chr18_62012639_62013327
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Minus
Query: 1 tctggggtgcactgtgtgtttctgtgtgtgctgaagtctcagaaacagcacaggctttct 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 489 tctggggtgcactgtgtgtttctgtgtgtgctgaagtctcagaaacaggacaggctttct 430
Query: 61 ctaccgagtgaaagcctaatatagggacaagtgctagaagagagagatctaacatgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctaccgagtgaaagcctaatatagggacaagtgctagaagagagagatctaacatgcctc 370
Query: 121 caccatagttttgcagattgggatatccagaaggatgagggagaagttgttaaagacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caccatagttttgcagattgggatatccagaaggatgagggagaagttgttaaagacaaa 310
Query: 181 cgagtgggcatgtgagcggtttccaggggaacaaaggcccttggcttagctcagaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cgagtgggcatgtgagcggtttccaggggaacaaaggcccttggcttagctcagaaataa 250
Query: 241 aagcatctacccgtgcacccaccaagtatatttccttgaagtatcctct 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aagcatctacccgtgcacccaccaagtatatttccttgaagtatcctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
