XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAAGC
CCTTCGTCTGCTCAAGGACTTTTAGGACTGTGGAACACCAGTCAAGGCTT
GGCTATGTCTAAAATTTCCACCTTTCTAGCCTTAATGTATGTTATATCCT
GTCTTCTTACTAAGACTACTACTTCTAAGACATCTTTTGCCTCTAAATTT
TTATCTATATAATATGTTGCTCTGACAAATCTATGGAAATATTCCTATGC
TTATCATTAACAAAATGGGCAGTATGTAGCTGCTGATCTAAAGCTGTGGT
AGATACCTTTTTAAAGTTTGCATTTTCAGATTTTTAAACCAAGGATCGTT
TCCTAACTCTAATAGGCAGCAAAACATAAGCAGGTCTCTAACAAAAACAT
AACACCAGGTTCCTTATCTAAATTAGGATCTACACAATTGGTTAATTGAC
AAGAATTACAATGAATATAAAAAGACTTGCCAAGATTGGCGATCTTAACT
CTTAAAATTATCTAACAATAAGCATATAGGTAAGGCACACAAACTTTCAT
AGCTATAAGGAGCTGGCCTGAATGCTCAAAAACAGTGTCTCTGACGAAAG
TATCTTGTACATTCTCTGTACCAGTCTTTTTGTCTCACGAGTCAGCTTTT
TTAGTTGTTTGTATTTTAAGTTGGCAACAGGTTGGTACTCCTTGTTGCAG
CCCATGGTGGAGATAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCAGCTCTGGCCCTCTCGAAGAGTAGT
ACATACTCTTAACCTTATATCCACCTCCTTAGTTCCAATAAAGTGGTATT
TTAAAAGCACAACCATTCCTGTGGAATTCATGCTAACCTTGTTATTTTTA
ATTAACAGGTTTCAACACTAAACTTGCACAATGTCTTTAAAACCAAGAGT
AGTGGATTTTGATGAGACATGGAACAAACTCCTAACTACAATCAAAGCTG
TTGTTATGTTGGAATATGTCGAGCGAGCAACATGGAATGACCGCTTCTCG
TATCCTTTGATGAAAGTCATAAGAAACATTAAATTAAAGCTTGTTAAAGA
AAGAAAACAAGTTTACAGCCTTAGGCATAACTGTTTTAGGATGTATTTCT
ATCAGTTTTATAGCAATCAGTTTTTCACAACCTTCCATTCAACAAGTCTC
CAGCACTGAGTATGTGTATCAGGCACTACTGTGGTGGTCAGAAGTATAGT
AATATAGTGTTTTAGGATTTTACTGCTGTGAACAGATACCATGATCAAGG
CAGCTTATAAAGAAGACATTAGATTGAGGCTGTCTTACAGGTTCAAAAGT
TCAGTCCAATATCATCAAGGCGGAAACATGGCAGCACACAGGCAAGCATG
GTGCAGGAGGAGCTGAGAGTTCTACATC

Query= MSMg01no206_d03.g1 MSMg01no206_d03.g1 CHROMAT_FILE:
MSMg01no206_d03.g1 PHD_FILE: MSMg01no206_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:18 2005
         (636 letters)



>mm_chr18_3399509_3400544
          Length = 1036

 Score = 1199 bits (620), Expect = 0.0
 Identities = 632/636 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccagctctggccctctcgaagagtagtacatactcttaaccttatatccacctccttagt 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 ccagctctggccctctcgaagagtagtacatactcttaaccttagatccacctccttagt 260

                                                                       
Query: 61  tccaataaagtggtattttaaaagcacaaccattcctgtggaattcatgctaaccttgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaataaagtggtattttaaaagcacaaccattcctgtggaattcatgctaaccttgtt 320

                                                                       
Query: 121 atttttaattaacaggtttcaacactaaacttgcacaatgtctttaaaaccaagagtagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttttaattaacaggtttcaacactaaacttgcacaatgtctttaaaaccaagagtagt 380

                                                                       
Query: 181 ggattttgatgagacatggaacaaactcctaactacaatcaaagctgttgttatgttgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggattttgatgagacatggaacaaactcctaactacaatcaaagctgttgttatgttgga 440

                                                                       
Query: 241 atatgtcgagcgagcaacatggaatgaccgcttctcgtatcctttgatgaaagtcataag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatgtcgagcgagcaacatggaatgaccgcttctcgtatcctttgatgaaagtcataag 500

                                                                       
Query: 301 aaacattaaattaaagcttgttaaagaaagaaaacaagtttacagccttaggcataactg 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 aaacattaaattaaagcttgttaaagaaagaaaacaagtttagagccttaggcataactg 560

                                                                       
Query: 361 ttttaggatgtatttctatcagttttatagcaatcagtttttcacaaccttccattcaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttaggatgtatttctatcagttttatagcaatcagtttttcacaaccttccattcaac 620

                                                                       
Query: 421 aagtctccagcactgagtatgtgtatcaggcactactgtggtggtcagaagtatagtaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtctccagcactgagtatgtgtatcaggcactactgtggtggtcagaagtatagtaat 680

                                                                       
Query: 481 atagtgttttaggattttactgctgtgaacagataccatgatcaaggcagcttataaaga 540
           |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 681 atagtgttttaggactttactgctgtgaacagacaccatgatcaaggcagcttataaaga 740

                                                                       
Query: 541 agacattagattgaggctgtcttacaggttcaaaagttcagtccaatatcatcaaggcgg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agacattagattgaggctgtcttacaggttcaaaagttcagtccaatatcatcaaggcgg 800

                                               
Query: 601 aaacatggcagcacacaggcaagcatggtgcaggag 636
           ||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaacatggcagcacacaggcaagcatggtgcaggag 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)