Query= MSMg01no211_b24.b1 MSMg01no211_b24.b1 CHROMAT_FILE:
MSMg01no211_b24.b1 PHD_FILE: MSMg01no211_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:00 2005
(323 letters)
>mm_chr18_10928495_10929217
Length = 723
Score = 501 bits (259), Expect = e-146
Identities = 293/313 (93%), Gaps = 14/313 (4%)
Strand = Plus / Minus
Query: 9 tctgaagaatttttaagctgttcttcttttacttgaatatcttcattcagttcttctaaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tctgaagaatttttaagctgttcttcttttacttgaatatcttcattcagttcttctaaa 561
Query: 69 atgttttcctcagactcactacaggaaccttcttcactgttccttaaagggtcttcactt 128
||||||||||| || |||||||||||||||| ||||||| |||||||
Sbjct: 560 atgttttcctcggaatcactacaggaacctttttcactg--------------ttcactt 515
Query: 129 ctattaccactcccttcagaatccgaagcatctccaactttaaaatcactgtcatcatca 188
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ctattaccacactcttcagaatccgaagcatctccaactttaaaatcactgtcatcatca 455
Query: 189 taatcaagagcttccaggagagaagcggccaaaggcttcacctgcctcctcttggagctg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 taatcaagagcttccaggagagaagcggccaaaggcttcacctgcctcctcttggagctg 395
Query: 249 cgatccataaggaatccgtgagatggtcgtttgaagacccagggaaagctgcaagaggca 308
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 394 cgatccataaggaatccgtgagatggtcgtttgaagacctagggaaagctgcaagaggca 335
Query: 309 aagcagcagggac 321
|||||||||||||
Sbjct: 334 aagcagcagggac 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_b24.g1 MSMg01no211_b24.g1 CHROMAT_FILE:
MSMg01no211_b24.g1 PHD_FILE: MSMg01no211_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:00 2005
(277 letters)
>mm_chr10_60290927_60291603
Length = 677
Score = 464 bits (240), Expect = e-135
Identities = 268/279 (96%), Gaps = 4/279 (1%)
Strand = Plus / Plus
Query: 1 cccattgtgtaaggggagggggatggaccagagcagagagattccaggagaaattcctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccattgtgtaaggggagggggatggaccagagcagagagattccaggagaaattcctcc 260
Query: 61 cgtgcagttgtacttccgagttaatgagaaagcccattaagacacttgactttccatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtgcagttgtacttccgagttaatgagaaagcccattaagacacttgactttccatttg 320
Query: 121 tttaagcgagatgggtgctcacttcggtgcaaagggagggagcagagggttaaggcacca 180
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 tttaagcgagatgggtgctcgcttcggtgcagagggagggagcagagggttaaggcacca 380
Query: 181 accagaaccgcacatgcggcaccagctcagacactagganaactccctttt--atgnngc 238
|||||||||||||| |||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 381 accagaaccgcacaagcggcaccagctcagacactaggaaaactccctttttaatt--gc 438
Query: 239 ccctttaaaagactgatctagagctctcaactccggctc 277
||||||||||||||||| ||||||||||||||||||||
Sbjct: 439 acctttaaaagactgatcaagagctctcaactccggctc 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
