Query= MSMg01no211_j06.b1 MSMg01no211_j06.b1 CHROMAT_FILE:
MSMg01no211_j06.b1 PHD_FILE: MSMg01no211_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:51 2005
(322 letters)
>mm_chr18_41959606_41960327
Length = 722
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Plus
Query: 5 gaattctatatttgcttgctctaattttcctgatttttttttgactggttctactaaaag 64
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatatttgcttgctctaatttttctgatttttttttgactggttctactaaaag 264
Query: 65 aggacaaactgtcaccttgagagctaaagccaaaaagtaatgaaacaactacagattaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggacaaactgtcaccttgagagctaaagccaaaaagtaatgaaacaactacagattaaa 324
Query: 125 aaaacaaaacaaaaaggttgttctaactagtaatgataatagtgaccaaaaaagtatctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaacaaaacaaaaaggttgttctaactagtaatgataatagtgaccaaaaaagtatctg 384
Query: 185 ggttcaagtgagagcagccattctctctggccattgtcacagcagtcattaggagcctgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggttcaagtgagagcagccattctctctggccattgtcacagcagtcattaggagcctgg 444
Query: 245 ctatgttaagagtactggtctaggggtagagcaatgagaccattcgactgccaagtctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctatgttaagagtactggtctaggggtagagcaatgagaccattcgactgccaagtctcc 504
Query: 305 tggaaacttttaaaa 319
|||||||||||||||
Sbjct: 505 tggaaacttttaaaa 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_j06.g1 MSMg01no211_j06.g1 CHROMAT_FILE:
MSMg01no211_j06.g1 PHD_FILE: MSMg01no211_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:51 2005
(247 letters)
>mm_chr18_42055583_42056229
Length = 647
Score = 418 bits (216), Expect = e-121
Identities = 241/250 (96%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 1 actatatagaacagggtaactttgaattcatggtgattctcctgcttcagctccacaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 actatatagaacagggtaactttgaattcatggtgattctcctgcttcagctccacaaat 503
Query: 61 attgtctgtcacatgtgatcctaaactggttttta-tttttatttttaa--tttcccccc 117
| |||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||
Sbjct: 502 actgtctgtcacatgtgatcctaaactgttttttattttttatttttaattttttccccc 443
Query: 118 aaatttcctgagcaaaagaaactgcatctttttcagttaattaatttcttttatattgat 177
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaatttccggagcaaaagaaactgcatctttttcagttaattaatttcttttatattgat 383
Query: 178 tcccagtttaagtagaatttaaaggtataattaaaattattcttgatcagtgacctttag 237
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcccagcttaagtagaatttaaaggtataattaaaattattcttgatcagtgacctttag 323
Query: 238 taggatatag 247
|||| |||||
Sbjct: 322 tagggtatag 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
