Query= MSMg01no212_b20.b1 MSMg01no212_b20.b1 CHROMAT_FILE:
MSMg01no212_b20.b1 PHD_FILE: MSMg01no212_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:47 2005
(313 letters)
>mm_chr18_54053428_54054138
Length = 711
Score = 547 bits (283), Expect = e-160
Identities = 302/309 (97%), Gaps = 2/309 (0%)
Strand = Plus / Minus
Query: 5 gaattcacaaagctaagaaatgttggagaagataggtattaaagtttcttttagagatag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaattcacaaagctaagaaatgttggagaagataggtattaaagtttcttttagagatag 605
Query: 65 ggtcttattatgtatcatagcctagtctcaaacttggaatcttcctgactcagactccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ggtcttattatgtatcatagcctagtctcaaacttggaatcttcctgactcagactccca 545
Query: 125 agttgtgagattacagttatgtaccaccatgccacatgaatatacatgtgttgaatatat 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aattgtgagattacagttatgtaccaccatgccacatgaatatacatgtgttgaatatat 485
Query: 185 tgtaatatacagatgaaagctaaaagcactaaaaaaaaaaagtagactttgaaaagagta 244
|||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 484 tgtaatatacagatgaaaactaaaagcactaaaaagaaa--gtagactttgaaaagagta 427
Query: 245 aatgacacacttcctttagaaatctcagctattgaatatgtgtgttctgggactaatctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 426 aatgacacacttcctttagaaatctcagctattgaatatgtgtgttctggggctagtctg 367
Query: 305 tcagctgtt 313
|||||||||
Sbjct: 366 tcagctgtt 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 711
Length adjustment: 9
Effective length of query: 304
Effective length of database: 702
Effective search space: 213408
Effective search space used: 213408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no212_b20.g1 MSMg01no212_b20.g1 CHROMAT_FILE:
MSMg01no212_b20.g1 PHD_FILE: MSMg01no212_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:47 2005
(283 letters)
>mm_chr18_53904849_53905531
Length = 683
Score = 501 bits (259), Expect = e-146
Identities = 274/279 (98%)
Strand = Plus / Plus
Query: 1 ctcccggaaagtcaaaagtaaaacaccatgacaggtaatagggcgaaacaataaaatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcccggaaagtcaaaagtaaaacaccatgacaggtaatagggcgaaacaataaaatagc 260
Query: 61 tgaagtgagatctcacgaagtagtggagtaggtgtgccgacacctgctgctttcttgctc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaagagagatctcacgaagtagtggagtaggtgtgccgacacctgctgctttcttgctc 320
Query: 121 tgtagacctagaagatgttttgagagcaattataattcaatctctgatccctgctgctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtagacctagaagatgttttgagagcaattataattcaatctctgatccctgctgctat 380
Query: 181 cttctgcactgctgtctttctcttctttgtctacaaaagaaaaggatattaagactgagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttctgcactgctgtctttctcttctttgtctacaaaagaaaaggatattaagactgagc 440
Query: 241 tatctttttgtggtggcgcacacctttaatcccagcaca 279
|| || |||||||||||||||||||||||||||||||
Sbjct: 441 tagctgggtgtggtggcgcacacctttaatcccagcaca 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
