Query= MSMg01no213_o19.b1 MSMg01no213_o19.b1 CHROMAT_FILE:
MSMg01no213_o19.b1 PHD_FILE: MSMg01no213_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:05 2005
(662 letters)
>mm_chr18_87130555_87131617
Length = 1063
Score = 1237 bits (640), Expect = 0.0
Identities = 655/660 (99%), Gaps = 1/660 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccttaagctccttcagcccttcccctagctcttctattggggaccccaggctc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccttaagcttcttcagcccttcccctagctcttctattggggaccccaggctc 263
Query: 64 agtctgatggttggctatgagtatctacatctatatttgtcaggttttggtagaacctct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agtctgatggttggctatgagtatctacatctatatttgtcaggttttggtagaacctct 323
Query: 124 cagagaagagtcatgccaggctcctgtcagcaaactcttcttggcatctaacgcctgtgt 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 cagagaagagtcatgccaggctcctgtcagcaaactcttcttgacatctaacgcctgtgt 383
Query: 184 ggctttcttgctctatgtcaaaagtgccaacttcatgcagccacccagtctattgtagtc 243
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 384 ggctttcttgctctatgtcaaaagtgccaactccatgcagccacccagtctattgtagtc 443
Query: 244 tctcttttgtaggttggacaatttgacaattagtttcatataaagaaagaaaatatttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctcttttgtaggttggacaatttgacaattagtttcatataaagaaagaaaatatttta 503
Query: 304 attgtctatttcacattgctatatgtatatgataattaaaa-caatgatgtctatgctgc 362
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 504 attgtctatttcacattgctatgtgtatatgataattaaaagcaatgatgtctatgctgc 563
Query: 363 taatctgaaatttttataccccttcctggtttcctggcatcaactcttttcctcatgttt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taatctgaaatttttataccccttcctggtttcctggcatcaactcttttcctcatgttt 623
Query: 423 aatatttataaacattcattgtacagcactttacctgttagtaaagcacatgcaggatga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatatttataaacattcattgtacagcactttacctgttagtaaagcacatgcaggatga 683
Query: 483 atagcaaatacctgaatttacttaattatatctttgatcagtttacaattacttgcttat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atagcaaatacctgaatttacttaattatatctttgatcagtttacaattacttgcttat 743
Query: 543 gtcagaggttgttgtaggaaacagcacttaataatttaagaattcagttcaaatatattc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtcagaggttgttgtaggaaacagcacttaataatttaagaattcagttcaaatatattc 803
Query: 603 taggtctctttcccaaaatgcagcagcaatcctgactcagcctaattgctcattgtaaaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taggtctctttcccaaaatgcagcagcaatcctgactcagcctaattgctcattgtaaaa 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space: 686556
Effective search space used: 686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_o19.g1 MSMg01no213_o19.g1 CHROMAT_FILE:
MSMg01no213_o19.g1 PHD_FILE: MSMg01no213_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:05 2005
(632 letters)
>mm_chr18_87166227_87167258
Length = 1032
Score = 1208 bits (625), Expect = 0.0
Identities = 630/632 (99%)
Strand = Plus / Minus
Query: 1 ttatctagggtcaccttaatagattcctgggagtttacattgtgccagatttctatcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 ttatctagggtcaccttaatagattcctgggagtttacattgtgccagatttctatcttg 946
Query: 61 cccctaaaattcccccaattctagttgtctctcttagtactctctcccttcatcctatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 cccctaaaattcccccaattctagttgtctctcttagtactctctcccttcatcctatcc 886
Query: 121 ctgccctatctctcctgttcccctcccacttgccccaactctaaccagaaaattaataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ctgccctatctctcctgttcccctcccacttgccccaactctaaccagaaaattaataac 826
Query: 181 ttttaaaagagaaggtaaacctatgacagtcatcattagtattcaaagatgaataaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ttttaaaagagaaggtaaacctatgacagtcatcattagtattcaaagatgaataaagag 766
Query: 241 atgttactaaaatctctaggcatgaagtctggacacataactgtacttaaaataaccaag 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 765 atgttactaaaatctctaggcatgaagtctggacacataactggacttaaaataaccaag 706
Query: 301 aaaacttaaaatgttcccagtatatatcttgaatattgtagaactagtaatggatgagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aaaacttaaaatgttcccagtatatatcttgaatattgtagaactagtaatggatgagat 646
Query: 361 aaatttaaagttttaattcttcaataacctagatcctgaacctacatgatgttacaaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaatttaaagttttaattcttcaataacctagatcctgaacctacatgatgttacaaaac 586
Query: 421 aatttttgctaatgaacaatttaagaatgtcccctactattcacaacctcttccagtcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aatttttgctaatgaacaatttaagaatgtcccctactattcacaacctcttccagtcaa 526
Query: 481 cagaacacatgatattttgcaattgtttatatgaggtgaattatgaggtcaccattactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cagaacacatgatattttgcaattgtttatatgaggtgaattatgaggtcaccattactc 466
Query: 541 tgtttataagtcaatattctaaaaaagaanatcaataggttaaactgtatggaatctcta 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 465 tgtttataagtcaatattctaaaaaagaaaatcaataggttaaactgtatggaatctcta 406
Query: 601 aaagccttgtagaaattgcctcatgtgattta 632
||||||||||||||||||||||||||||||||
Sbjct: 405 aaagccttgtagaaattgcctcatgtgattta 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
