CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCACCATCCCCTACGTCTTTTTCTACTTTCACTAGAATTATACTA
TCACTATGGAAATTCTGTTTCAGACAGCCCCAGAGAGTCCTCTCCAGTAT
TATAGAGAAGTAAGGACTACAAAAATCACATGTAAGCCTGGGTAATGATA
GTGTCATTATCTGCTATTTAATTGATCAATTTCATGAGAGGACAAGATTA
ACATATCTTATCCCATTTAAGATCCCATTTGTTCTATTTAAGTTTCTTCC
TGTCATTGTTTGGTTCCAAAATATATCACAACCATCAATTTATGTTTCTG
AACTCAATAAACACGCATATAGGCAGACCAATAGGTTAAAGCATTCTCCC
CAATGATAACAAGGAGGCTAAAATGAGCTAGTTTGATCAAAGAGGTGAAA
ATGTCTTTCCAAGTACTCAGAGAATATTTTCACGGTCTATGAGGCTTTCA
GCTTTGAAGGAATGCTGAAATAACATAGAAAATAGAGTACTCTTACAAAA
TAGAGTATTTTAACCCATGAGATCTTCAGTGAGATCAACATAACTCACTG
TAAGGATAATAGGCATGAGAAAGTATAACATCCCATAATAATAACATGGA
TCAATTGAGGAACCAGGATTTGTAGCACTAATATACAAGATGAAGAACTT
TGAAATAATTAATAGACCCTAGCCCATCCTAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCATGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAAGATC
CAGCAATACCTCTCCTGGGTATATATCCAGACCACGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATATTAGCCAG
AAGCTGGAAAGAACCCAGATGACCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGGA
TCTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGTATCATCCTGAG
TGAGGTAACACATTCACAAAGGAACTCACACAACATGTACTCACTGATAA
GTGGATATTAGCCCCCAACCTAGGATTCCCAAGATATAAGATACAATTTG
CTAAACACATGAAACTCCAGAATAATGACGAAT

Query= MSMg01no214_c05.b1 MSMg01no214_c05.b1 CHROMAT_FILE:
MSMg01no214_c05.b1 PHD_FILE: MSMg01no214_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:22 2005
         (571 letters)



>mm_chr18_49225845_49226815
          Length = 971

 Score = 1065 bits (551), Expect = 0.0
 Identities = 563/567 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcaccatcccctacgtctttttctactttcactagaattatactatcactatgg 64
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaccatcccctaagtctttttctactttcactagaattatactatcactatgg 264

                                                                       
Query: 65  aaattctgtttcagacagccccagagagtcctctccagtattatagagaagtaaggacta 124
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaattctgtttcagacagtcccagagagtcctctccagtattatagagaagtaaggacta 324

                                                                       
Query: 125 caaaaatcacatgtaagcctgggtaatgatagtgtcattatctgctatttaattgatcaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaaaatcacatgtaagcctgggtaatgatagtgtcattatctgctatttaattgatcaa 384

                                                                       
Query: 185 tttcatgagaggacaagattaacatatcttatcccatttaagatcccatttgttctattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttcatgagaggacaagattaacatatcttatcccatttaagatcccatttgttctattt 444

                                                                       
Query: 245 aagtttcttcctgtcattgtttggttccaaaatatatcacaaccatcaatttatgtttct 304
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagtttcttcctttcattgtttggttccaaaatatatcacaaccatcaatttatgtttct 504

                                                                       
Query: 305 gaactcaataaacacgcatataggcagaccaataggttaaagcattctccccaatgataa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaactcaataaacacgcatataggcagaccaataggttaaagcattctccccaatgataa 564

                                                                       
Query: 365 caaggaggctaaaatgagctagtttgatcaaagaggtgaaaatgtctttccaagtactca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaggaggctaaaatgagctagtttgatcaaagaggtgaaaatgtctttccaagtactca 624

                                                                       
Query: 425 gagaatattttcacggtctatgaggctttcagctttgaaggaatgctgaaataacataga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagaatattttcacggtctatgaggctttcagctttgaaggaatgctgaaataacataga 684

                                                                       
Query: 485 aaatagagtactcttacaaaatagagtattttaacccatgagatcttcagtgagatcaac 544
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atatagagtactcttacaaaatagagtattttaacccatgagatcttcagtgagatcaac 744

                                      
Query: 545 ataactcactgtaaggataataggcat 571
           |||||||||||||||||||||||||||
Sbjct: 745 ataactcactgtaaggataataggcat 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)