Query= MSMg01no217_b08.b1 MSMg01no217_b08.b1 CHROMAT_FILE:
MSMg01no217_b08.b1 PHD_FILE: MSMg01no217_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:24 2005
(316 letters)
>mm_chr18_32812539_32813255
Length = 717
Score = 559 bits (289), Expect = e-164
Identities = 307/313 (98%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcctctttaaaagaa-tttgtgacctggcatgttgtgcacatggcttagaagt 63
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattcctcctctttaaaagaattttgtgacctggcatgctgtgcacatggcttagaagt 264
Query: 64 agaggactgatcatgcccatatcataccttgggttccatcggtagtactgtacacccata 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaggactgaccatgcccatatcataccttgggttccatcggtagtactgtacacccata 324
Query: 124 gaaaaggaaagaatggtacttgaccccacaggtaaaatatataaagaagttatgaagttt 183
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 gaaaaggaaagaatggtacttgaccccacagataaaatatataaagaagttatgaagttt 384
Query: 184 ggaatttgaatggtgttgtgaggttggatttgaagcaggttacaacttaaatccattgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggaatttgaatggtgttgtgaggttggatttgaagcaggttacaacttaaatccattgta 444
Query: 244 aagccaaggaggtatctggttaaataatgaaatttgtttcttgtggttggaatccttttc 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 aagccaaggaggtatctggttaaataatgaaatttggttcttgtggttggaatccttttc 504
Query: 304 taagcaaggaaga 316
|||| ||||||||
Sbjct: 505 taagtaaggaaga 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 717
Length adjustment: 9
Effective length of query: 307
Effective length of database: 708
Effective search space: 217356
Effective search space used: 217356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_b08.g1 MSMg01no217_b08.g1 CHROMAT_FILE:
MSMg01no217_b08.g1 PHD_FILE: MSMg01no217_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:24 2005
(291 letters)
>mm_chr18_32944943_32945633
Length = 691
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Minus
Query: 1 atttaaaggaatcgtgttggagagaaagatgttttgttgacttttcaagtccttcattta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 491 atttaaaggaatcgtgttggagagaaagatgttttgttgacttttcaagtttttcattta 432
Query: 61 agtaaaaataaggactttttctcttttagtatgaatggacatttaaagctcacacccgaa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 431 agtaaaaataaggactttttctcttttagtatgaatggacattaaaagctcacacccgaa 372
Query: 121 caatcaagtgatatttgattttcagagcattttgtcgagatctcacacaggcacacccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caatcaagtgatatttgattttcagagcattttgtcgagatctcacacaggcacacccat 312
Query: 181 gtgtattatcagcatgggactggggtgaggggggagagagctggagggaaaggagagtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtgtattatcagcatgggactggggtgaggggggagagagctggagggaaaggagagtgg 252
Query: 241 ccatggtaccttctggaaggggagctgagaacctcggtgaggggtctcgcc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccatggtaccttctggaaggggagctgagaacctcggtgaggggtctcgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
