CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTATCCAAAACATAGTAGTTGAGCCTCAAACACGAGGGCTGAGCAG
CTGTCCCTATTCCGTTGTTTCTGCTGGACAACAGGAGTCCTATAGCAGGC
AAATAAGAGCTGCCAAAACTGAGGAATCTGCTGTGTGACTTCAAAGTATA
GAGATGAAAAGTTATGGCCCACTCAGAAAACTGATGTTGGGCCAGTCCAG
TCTGTCTAAAAGGGTCATACAAGAATTCTCAAAACACTACCATTGCTGTA
TGACTTTCAGAAAATTGCCTTGCTATGGAGTAATCAATAGGAACAAAACA
ATAGAACACTTTCTTTAACAGAGGAGTTAGATCTTCACATAGGCTGGCCC
AGCACAAAGATCAGGGCCATGGATGTTACATGCAAAATGCAGCATTGGAA
ACTCAAGGGTAAAACACATTCCAAATAAACAGAGCTTCATCATGGGCCTG
CTAATATCCTGGAAACATCGACAAACACATAGATCCATACTCTCCGTTGG
ATTGCCCAATGCAGTCCATCTCAAACTCAGGAGTAGACTCTGTTTCCTGC
TCTGAGCAGTGTTCTCTCTGTGCAACTCACACAGACTCCACCAACCTTGG
GGAAGAGAGGTTCAAGTCAGAAGAAGAGGCTCGTGGGAAGCAGACTTTGG
TCCTAGCAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGAGTGGTTGTACCAGCTTGCAG
TCCCACCAGCAGTGGAGGAGTGTTCCTCTTTCTCCACATCCTCACCAGCG
TCTGCTGTCACCTGGGTGTTTGATCTTAGCCATTCTGACTGATGTGAGGT
GGAATCTCAGGGTTGTTTTGATTTACATTTCCCTAATTATTAAGGATTTT
GAACATTTTTTTAGGTGCTTCTCAACCCTTCGGTATTCCTCAGTTGAGAA
TTCTTTGTTTAGCTCTGTACCCCATTTTTAAAATAGGGTTATTTGGTTTT
CTAGAGTCAAATTTCTTGAGCCCCTACCATATATTGAATATTAGCCTCCT
ATCAGATTTAGGATTGGCAAAGATTTTTTCCCAATCTGTTGGTGGCCTTT
TTTGTCTTATTGACAGTATCCTTTGCCTTATAGAAGCTTTGCAATTTTAT
GAGGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGCTGTTC
TGTTTAGGAATCTTTCCCCTGTGTCCATATCTTTGAGACTCTTTCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCTTTGAT
CCACTTACACTTGAGCTGCACTAGGAGATAACAAAAATGCTTCAATTTAC
ATTCTTTCTAATGATAACCGCCG

Query= MSMg01no233_h15.b1 MSMg01no233_h15.b1 CHROMAT_FILE:
MSMg01no233_h15.b1 PHD_FILE: MSMg01no233_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:11 2005
         (664 letters)



>mm_chr18_4614637_4615698
          Length = 1062

 Score = 1224 bits (633), Expect = 0.0
 Identities = 653/661 (98%), Gaps = 4/661 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatccaaaacatagtagttgagcctcaaacacgagggctgagcagctgtcccta 64
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattctatccaaaacatagtagttgagcctcaaacacgagggctgatcagctgtcccta 264

                                                                       
Query: 65  ttccgttgtttctgctggacaacaggagtcctatagcaggcaaataagagctgccaaaac 124
           |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||
Sbjct: 265 ttccgttgtttctgctggacaacaggagtcctatagcaggcaaat---agctgccaaaac 321

                                                                       
Query: 125 tgaggaatctgctgtgtgacttcaaagtatagagatgaaaagttatggcccactcagaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgaggaatctgctgtgtgacttcaaagtatagagatgaaaagttatggcccactcagaaa 381

                                                                       
Query: 185 actgatgttgggccagtccagtctgtctaaaagggtcatacaagaattctcaaaacacta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 382 actgatgttgggccagtccagtctgtctaaaagggtcatacaagaattctcaagacacta 441

                                                                       
Query: 245 ccattgctgtatgactttcagaaaattgccttgctatgg-agtaatcaataggaacaaaa 303
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| 
Sbjct: 442 ccattgctgtatgactttcagaaaattgccttgctatggaagtaatcaataggaacaaag 501

                                                                       
Query: 304 caatagaacactttctttaacagaggagttagatcttcacataggctggcccagcacaaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 caatagaacactttctttaacagaggagttagatcttcacataggctggcccagcacaaa 561

                                                                       
Query: 364 gatcagggccatggatgttacatgcaaaatgcagcattggaaactcaagggtaaaacaca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gatcagggccatggatgttacatgcaaaatgcagcattggaaactcaagggtaaaacaca 621

                                                                       
Query: 424 ttccaaataaacagagcttcatcatgggcctgctaatatcctggaaacatcgacaaacac 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttccaaataaacagagcttcatcatgggcctgctaatatcctggaaacatcgacaaacac 681

                                                                       
Query: 484 atagatccatactctccgttggattgcccaatgcagtccatctcaaactcaggagtagac 543
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 atagatccatactctcagttggattgcccaatgcagtccatctcaaactcaggagtagac 741

                                                                       
Query: 544 tctgtttcctgctctgagcagtgttctctctgtgcaactcacacagactccaccaacctt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tctgtttcctgctctgagcagtgttctctctgtgcaactcacacagactccaccaacctt 801

                                                                       
Query: 604 ggggaagagaggttcaagtcagaagaagaggctcgtgggaagcagactttggtcctagca 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ggggaagagaggttcaagtcagaagaagaggctcgtgggaagcagactttggtcctagca 861

            
Query: 664 g 664
           |
Sbjct: 862 g 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1062
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1052
Effective search space:   688008
Effective search space used:   688008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)