ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTATGATAAATACAAAGAAAAAGTGACAGTTTTTATGATATGGCTGA
AACTCTATGCAGGAAATTTTTTTTTGTGCATTGAATCACTTATGAATTCT
GTGTGATTTTTTTTTTGTCCCAGGAGTGTAAGAAAACTGCTCTTTTTATA
TTACTAAGTGATGCAGTGTGTAGCCTAAACAGATGGAAACAGCTTGACTT
TAACATAAGTGTTAGAATATGCAGTATAAGAGTAGAAACCTACAAGGTGC
AACTAACAAAAAAAATCTTTATCATGAAATGATCAAATTTGCCTGGATTC
ATTCTTTTAATATAACCTTTTGATAAAATTAAGGCATAATGTCAAATACT
TTCACCTCATGAAAATAAAACACAAATAACCTAATAAATGGTATAGAATC
CTTACTAATATTAGGTAATTTAAAATCATCTTCACTTATGTGCATGAATT
TGAGTGTCTATTTGATTGTGTGCCAAGGGGTGTAGCACCAACAGGGAACC
ACACATGGTATCAGAAACCATTGAATTGGAGGGACAGGCAGTTGTGAACC
AACTGACATGGGTGTGAAGAACAGAGTTTGGGCCCTCCAGGAGAGCAGTA
AGCTTTGCTATTTGCTGAGGAATCTTTCCATCCCAAAGTAGTGTTTTTAT
TGCTATAAAGATTTTCTCTTTTCAAGC

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTAAAATATTATAATTTATTTTTAT
AGTGGAAAATTTCAACCAGAGAACAATACAGACAATCATTTTCAATGTAA
TAATTGAAAAGCTAAAGATTAAGGAAGAGAAAGTAAATGTAAGTTAAGAA
ATTAAATAAATCAATGAAATACAAATATCTCATATATGTGTTTCTGGTTC
TGGGTTGCCTCACTCAGGTTGATCTTTTCTAGGTCCACTCATTTGTCTGC
AAATTTCATAGTGTCATTTTTTTAAGAGCTTAGAAATACTCTATTAGATA
AAGGCACCACATTTTCTTTAACCATTCTTTTTTTTTTTTTTTTCTTTAAC
CATTCTTCTGTTGAGGGACAGCTAGCAGCTAGGTTGTTTCCAGATTCTGG
TTATGAATAAAACTACAATTATTGGTATCAGGACCTCTGAAACCTGTGAC
ATCACATAGGTGTGACCTGCACACCTTTTGCCAAGGCAACAGCCACCATA
TTCTGAGAATCCACTTGGCTCACCTCCCACCTTTATTTGTGACTACATCA
CTATCCATATATAAAGAAAGGCCCCTGTGATCATCTCTCTCTCTCTCTCT
CTCTCTCTCTCCTCTCTCGTCTCTCCTCCCTCCTCTCTCCTCCCTCCTCC
CTCCCCCCTCCCCCTCTCTCCCCTTCTCTCTN

Query= MSMg01no233_m12.b1 MSMg01no233_m12.b1 CHROMAT_FILE:
MSMg01no233_m12.b1 PHD_FILE: MSMg01no233_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:34 2005
         (680 letters)



>mm_chr18_17525371_17526451
          Length = 1081

 Score = 1274 bits (659), Expect = 0.0
 Identities = 674/679 (99%), Gaps = 3/679 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctttatgataaatacaaagaaaaagtgacagtttttatgatatggctgaaactc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttatgataaatacaaagaaaaagtgacagtttttatgatatggctgaaactc 263

                                                                       
Query: 64  tatgcaggaaattttttttt-gtgcattgaatcacttatgaattctgtgtgatttttttt 122
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatgcaggaaattttttttttgtgcattgaatcacttatgaattctgtgtgatttttttt 323

                                                                       
Query: 123 ttgtcccaggagtgtaagaaaactgctctttttatattactaagtgatgcagtgtgtagc 182
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 t-gtcccaggagtgtaagaaaactgctctttttatattactaagtgatgcagtgtgtagc 382

                                                                       
Query: 183 ctaaacagatggaaacagcttgactttaacataagtgttagaatatgcagtataagagta 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctaaacagatggaaacagcttgactttaacataagtgttagaatatgcagtataagagta 442

                                                                       
Query: 243 gaaacctacaaggtgcaactaacaaaaaaaa-tctttatcatgaaatgatcaaatttgcc 301
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 443 gaaacctacaaggtgcaactaacaaaaaaaaatctttatcatgaaatgatcaaatttgcc 502

                                                                       
Query: 302 tggattcattcttttaatataaccttttgataaaattaaggcataatgtcaaatactttc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tggattcattcttttaatataaccttttgataaaattaaggcataatgtcaaatactttc 562

                                                                       
Query: 362 acctcatgaaaataaaacacaaataacctaataaatggtatagaatccttactaatatta 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 acctcatgaaaataaaacacaaataacctaataaatggtatagaatccttactaatatta 622

                                                                       
Query: 422 ggtaatttaaaatcatcttcacttatgtgcatgaatttgagtgtctatttgattgtgtgc 481
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggtaatttaaaatcattttcacttatgtgcatgaatttgagtgtctatttgattgtgtgc 682

                                                                       
Query: 482 caaggggtgtagcaccaacagggaaccacacatggtatcagaaaccattgaattggaggg 541
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 683 caaggggtgtagcaccaacagggaaccacacatggtatcagaaaccattgaattggagag 742

                                                                       
Query: 542 acaggcagttgtgaaccaactgacatgggtgtgaagaacagagtttgggccctccaggag 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 acaggcagttgtgaaccaactgacatgggtgtgaagaacagagtttgggccctccaggag 802

                                                                       
Query: 602 agcagtaagctttgctatttgctgaggaatctttccatcccaaagtagtgtttttattgc 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agcagtaagctttgctatttgctgaggaatctttccatcccaaagtagtgtttttattgc 862

                              
Query: 662 tataaagattttctctttt 680
           |||||||||||||||||||
Sbjct: 863 tataaagattttctctttt 881


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1081
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1071
Effective search space:   717570
Effective search space used:   717570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)