Query= MSMg01no235_c12.b1 MSMg01no235_c12.b1 CHROMAT_FILE:
MSMg01no235_c12.b1 PHD_FILE: MSMg01no235_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:25 2005
(308 letters)
>mm_chr18_77789764_77790471
Length = 708
Score = 580 bits (300), Expect = e-170
Identities = 303/304 (99%)
Strand = Plus / Plus
Query: 5 gaattcacagcaaagggacagttgtcaggaagcagatcctctccacacatggtatctgtc 64
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattcacagcaaagggacagttgtcaggaagcagatcctctccacacacggtatctgtc 264
Query: 65 gacacctagaccctggacttccaaggtcccagaacaataaaacttaagcttccgttttgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacacctagaccctggacttccaaggtcccagaacaataaaacttaagcttccgttttgt 324
Query: 125 tattatgactggagtagactcagatagtagcaaagatggcacccctaagaggaggaacaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tattatgactggagtagactcagatagtagcaaagatggcacccctaagaggaggaacaa 384
Query: 185 agtgcaggggaccttgagacaggtagtcaccaatcaacatgcctcctccctcagtacagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgcaggggaccttgagacaggtagtcaccaatcaacatgcctcctccctcagtacagg 444
Query: 245 ggagctgcctctggccagccttgagctaggttcccaggctaacacttcccatctcacgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggagctgcctctggccagccttgagctaggttcccaggctaacacttcccatctcacgtt 504
Query: 305 ccag 308
||||
Sbjct: 505 ccag 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_c12.g1 MSMg01no235_c12.g1 CHROMAT_FILE:
MSMg01no235_c12.g1 PHD_FILE: MSMg01no235_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:25 2005
(283 letters)
>mm_chr18_77911316_77911998
Length = 683
Score = 520 bits (269), Expect = e-152
Identities = 278/281 (98%), Gaps = 2/281 (0%)
Strand = Plus / Minus
Query: 1 tcattattgaagagaattatat-gactaggaatattttgtaaagtaactgatacttagtt 59
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcattattgaagagaattatatatactaggaatattttgtaaagtaactgatacttagtt 421
Query: 60 ggtcatgacagcagtgtttatttctgcactaaagaggggaaagttttggttttcttaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggtcatgacagcagtgtttatttctgcactaaagaggggaaagttttggttttcttaaag 361
Query: 120 tttataggtgattttttttcactttagttttctgcaaaaggtaacacttatgatgtacaa 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tttataggtga-tttttttcactttagttttctgcaaaaggtaacacttatgatgtacaa 302
Query: 180 aggatatttcaagaaaaagcatattggttatctaaatttattcttaaccatgtaaactca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggatatttcaagaaaaagcatattggttatctaaatttattcttaaccatgtaaactca 242
Query: 240 atagcaagaataattttaaaaagcactttaacaggtgctta 280
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagcaagaataattttaaaaagcactttaacaggtgctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
