TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGNAAATCCGCGGAAT
TCAGAGGTTCCTTACCGTTATATGTTTCCTTCAAACCTCAACCTATACCC
TAACAAGAGGATTTAAGAACTTCAGTGCCATATACTCACGGAAAGACTCA
AACTGCTTTTGATTTACTCAGTAAATAGTAGCTAATGTGTTAGCGTTTAT
GTATGCTAAAAATTAATTCTACTTTTATACACTACTACATTTTATATAGA
TATTGTGCACAATGTCAAGTACTCACAGAAAATAGAACACTTCAGGCCAA
AAACTAAGTCTTTGCTCTACATTTTATTAAATGCTCAAATTCCAGAGAGC
AGATTTAATCAAATTATTTTAAAAGGATCTTTCATGTACATCACAGTCAT
GGTCAAATGTCTAATACAACAGGGCCTATGTTTACTTAGTGACAAATTTC
AAAATGCATGTTTTGACCTGTTTATTGTTTTGGGAAGTAAAGGATCTATT
TTTAAGCTCTTCCCTCAGATTCCCTAGAAAGACCAGGTAGTGTCAAGAAA
TATCTAATTCTGTCCAAAGTAATCCTCATTAAGCGATGCATCTGGAAGTT
TTTTCTGTTACCTCAGAGCTAAAGCCACTGCTGACGTGCCTAGAGGTACC
GCCTGCATGTTTCCTTTACTGCCAAAGATGAGTCCTTTTCTGGCTTTGGT
TTCTGGCACTCGGAATATTTTTTTTTTCCTTTTAGGAAGATATGACCAGA
GAAGATGAAAN

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCCTCTCTCTCCCTCCCTCCCCCCTCTCTCTGTTTGTTTGTTT
TGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGT
ATAGCCCTGGCTGTCCTGGAATTCACTCTGTAAACCAGGCTGGCCTCGGA
CTCAAAAATCCACCTGCCTCTTCCTCCCAAATGCTGGGATTAAAGGCATG
TGCCACCACCTGTTTAGACTGTACCCCACCTTTTAATTACGTTATTTGGT
TTGTTGATGTCTAGTTTCTTGAGTTATTTATGTGTTTTGGATATCAGCCC
TCTGTGGTGTTGCCCAACATCTTTTCTCATTCTGTAGGTTGCCATTTGTC
CTTTTGATGGTCTCCTTTGCTTTACAGTTTCATAAGGTCCCATTTATTAA
TTGTTGATCTTAGTGCCTGAGCTATTAGGGTTTCTTCAGGATGGTGTCTC
TTGTACCAATGTGTTCAAAACTGTTTTCCACTTTCTCTTCTATCAGGGTT
AGTGTATCTAGTTTTATGTTAAGGTCTTTGTTCTACTTTGGACTTTTTTG
TGTACACAGATAGGCATTTATTCTTCTGAACGGATGCACTTATTTAAAAC
AGCACCATTTGTTGAAAAAGCTCCCCTTTAACCTTGGAAAATTTTGGTTC
CCTTTG

Query= MSMg01no260_b12.b1 MSMg01no260_b12.b1 CHROMAT_FILE:
MSMg01no260_b12.b1 PHD_FILE: MSMg01no260_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:05 2005
         (633 letters)



>mm_chr18_8897939_8898971
          Length = 1033

 Score = 1062 bits (549), Expect = 0.0
 Identities = 606/633 (95%), Gaps = 16/633 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagaggttccttaccgt---tatatgtttccttcaaacctcaacctatacccta 60
           |||||||||||||||  ||  ||   |||||||||||||||||||||||| |||||||||
Sbjct: 204 ggaattcagaggttc--ta-ggttgctatatgtttccttcaaacctcaacgtatacccta 260

                                                                       
Query: 61  acaagaggatttaagaacttcagtgccatatactcacggaaagactcaaactgcttttga 120
           |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 261 acaagaggatttaagaacttcagtgccatatactcatggaaagactcacactgctttcga 320

                                                                       
Query: 121 tttactcagtaaatagtagctaatgtgttagcgtttatgtatgctaaaaattaattctac 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| 
Sbjct: 321 tttactcagtaaatagtagctaatgtgttagcgtttatttatgctaaaaattaatcctat 380

                                                                       
Query: 181 ttttatacactactacattttatatagatattgtgcacaatgtcaagtactcacagaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttatacactactacattttatatagatattgtgcacaatgtcaagtactcacagaaaa 440

                                                                       
Query: 241 tagaacacttcaggccaaaaactaagtctttgctctacattttattaaatgctcaaattc 300
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ----------caggccaaaaagtaagtctttgctctacattttattaaatgctcaaattc 490

                                                                       
Query: 301 cagagagcagatttaatcaaattattttaaaaggatctttcatgtacatcacagtcatgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cagagagcagatttaatcaaattattttaaaaggatctttcatgtacatcacagtcatgg 550

                                                                       
Query: 361 tcaaatgtctaatacaacagggcctatgtttacttagtgacaaatttcaaaatgcatgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tcaaatgtctaatacaacagggcctatgtttacttagtgacaaatttcaaaatgcatgtt 610

                                                                       
Query: 421 ttgacctgtttattgttttgggaagtaaaggatctatttttaagctcttccctcagattc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttgacctgtttattgttttgggaagtaaaggatctatttttaagctcttccctcagattc 670

                                                                       
Query: 481 cctagaaagaccaggtagtgtcaagaaatatctaattctgtccaaagtaatcctcattaa 540
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cctagaaagaccagatagtgtcaagaaatatctaattctgtccaaagtaatcctcattaa 730

                                                                       
Query: 541 gcgatgcatctggaagttttttctgttacctcagagctaaagccactgctgacgtgccta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 731 gcgatgcatctggaagttttttctgttacctcagagctaaagccactgctgacgtaccta 790

                                            
Query: 601 gaggtaccgcctgcatgtttcctttactgccaa 633
           |||||||||||||||||||||||||||||||||
Sbjct: 791 gaggtaccgcctgcatgtttcctttactgccaa 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)