Query= MSMg01no260_h22.b1 MSMg01no260_h22.b1 CHROMAT_FILE:
MSMg01no260_h22.b1 PHD_FILE: MSMg01no260_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:36 2005
(681 letters)
>mm_chr18_71893718_71894798
Length = 1081
Score = 1249 bits (646), Expect = 0.0
Identities = 670/680 (98%), Gaps = 5/680 (0%)
Strand = Plus / Plus
Query: 5 gaattctggtcctttaccgaa---cagcaaaggatcagcatctgagttgcatgtctaatt 61
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctggtcctttac--aagagcagcaaaggatcagcatctgagttgcatgtctaatt 261
Query: 62 ccttgttttgtacagtatgtactaatagctgtctcgtgagaggctcttccagtgcctgac 121
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 262 ccttgttttgtacagtatgtactaatagctgtctcgtcagagactcttccagtgcctgac 321
Query: 122 aaatacagaagtggatactcacagccaaccattggacagagcacagtgtccccaatggag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaatacagaagtggatactcacagccaaccattggacagagcacagtgtccccaatggag 381
Query: 182 gagctagagaaaacacccaaggagctaaagcggtttgcagccccatgggaggaataacaa 241
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 382 gagctagagaaaacacccaaggagctaaaggggtttgcagccccatgggaggaataacaa 441
Query: 242 tatgaactaaccagtacccacagagctcccagtgactaaaccgtcaaccaaagaaaacac 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 442 tatgaactaaccagtacccacagagctcccagtgactaaaccgtcaaccaaagaaaatac 501
Query: 302 atggtgggacttatggctctagctgcatatgtagcagaggatgtcgtagtaggtcatcaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atggtgggacttatggctctagctgcatatgtagcagaggatgtcgtagtaggtcatcaa 561
Query: 362 tgggaggagaggcccttggccctgtgaagatcatatgccccaatataggagaataccacg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgggaggagaggcccttggccctgtgaagatcatatgccccaatataggagaataccacg 621
Query: 422 gccaggaagcaggaatggatgggttggtgagcagaggggaaattaggaaagggaataaca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gccaggaagcaggaatggatgggttggtgagcagaggggaaattaggaaagggaataaca 681
Query: 482 tttgaaatgtaaataaagaaaatatctaataaaaaagttaaagaaaataaaaacaataaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttgaaatgtaaataaagaaaatatctaataaaaaagttaaagaaaataaaaacaataaa 741
Query: 542 attcagtttaaaattattcttctttagttacaaaaactaaccaaaagctgggataaccaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 attcagtttaaaattattcttctttagttacaaaaactaaccaaaagctgggataaccaa 801
Query: 602 tgatatagttttaaaaccctggccatcaatcctttctattttaatattctcatttagtgc 661
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 802 tgatatagttttaaaaccctggccatcaaacctttctattttaatattctcatttagtgc 861
Query: 662 ctgctcacttatttttgaga 681
||||||||||||||||||||
Sbjct: 862 ctgctcacttatttttgaga 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_h22.g1 MSMg01no260_h22.g1 CHROMAT_FILE:
MSMg01no260_h22.g1 PHD_FILE: MSMg01no260_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:36 2005
(292 letters)
>mm_chr18_72065051_72065742
Length = 692
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%), Gaps = 1/290 (0%)
Strand = Plus / Minus
Query: 1 aaagactgtgggataccaaagagattctcttagattcagcatgatgggaacctgcaagca 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 490 aaagactgtgggataccaaagagattctcttagattcagcatgatgggaaaatgcaagca 431
Query: 61 gtgaaatgaaaatgggattagattagagagagtaattgagtgtgtacgttccgttggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtgaaatgaaaatgggattagattagagagagtaattgagtgtgtacgttccgttggagg 371
Query: 121 gaggaaaacgcaggcctggagattagtgaggatgtcgtacttgtaatccatcaagtgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaggaaaacgcaggcctggagattagtgaggatgtcgtacttgtaatccatcaagtgatt 311
Query: 181 agagctgtatcatgaggtggtgacagggttaataaaaatgaaaggatgcttcaagagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agagctgtatcatgaggtggtgacagggttaataaaaatgaaaggatgcttcaagagatg 251
Query: 241 ggtcaatcccacacagtgactcattggaaatagatgatgaagggaaaaaa 290
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 250 ggtcaatcccacacagtgactcattggaaatagatgatgaagg-aaaaaa 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
