NCCCTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTGGCATCACAATACCTTTGGCCTCTGTGGGTAT
TACACTCACACACATATCTAGACATACACTTAAGTTTATATATATGTATA
TGTATATGTATATGTATGTGTATGTGTATGTGTATGNNNNNNNNNNNNNN
NNNTNNNNNNTTNCNNCTTNNCCTTTTCCTTTTTTTTTTCTTTTTCCCTT
TTTCTTTTTTTCTTTCCTTTTTCTTTTTCTTTCTTCTTCCTTCTCTTTTT
TTCCTTCCCTCCTTCCTTCTTTTTTTTTTTTCCTCCTTCCCCCTTCTTCA
CCTTTCTCTTTTTTTTTTTTTTTTTTTTCCCCCCCTCCCCCTTTTTTTCA
TTTATTTCATCTTTTAAATTTCCTTACTCCTTCCTCCCCCTTTTAAAAAT
TCATTCATTTTTTTCACTTATATTTTACTCCCTACTTTTTCCACTTTTTT
TCTCTTATTACTCTCCTCTTTCTTAACTCTCCATTTTTTTTCTTTTTAAT
TATTCAATTTCCACTTCTCTTCTCTTCCTTTTTTTTTTTTTTCTTTATTA
CATTTTTAATTAACATCTTTATATTCACAATCTCCTTCTTTCCCTTTTTC
CTTTCCCCTTTATTTTTCTCTACTCCATTTCTCCACTTTTATTCTTTTTT
CTCCATTTCAATCATTTTCCTTTTTTTTTTCTTTATTTTCACTCTTTTTT
CACTCTCTATACACATTCTCAATTTTTTAT

NNNNNACGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTTGTAGACCAGGCTGGC
CTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAA
GGCGTGCACCATAACGCCTGGCTTGATGTAGCATTTCTTTGTAAGCTAAC
TTTGTAAAGTAATGGGTTGGTTTTAGAATGTCTGTAACTGTCTGCTACCT
CATGGTCCTTTTATATTGTCTCCACCATGAGGAATCCTCCCTCATTAGAA
CCACCTCGTTCACTGTGGTCCAGCCATGACTCCCATGGATGCATCTCTAT
TAATAAAGCTCATTTTCTGACAGGTAGTTTCATGCCAGCTTCCAAGCCAT
CATCTATCTCTCCATAACATGAACCTGCCAACTTCACATATTAATATGTC
TCAAATATTACCTCCTTATCGCTCTTGTTTGTTTCAGTGTTTCTCTTCTC
TTCATCCTCTTTCTTTTTCTTTTCAGCAGCTTCTTTTTCCCTGAGAGAAG
GGATTGAAAGAAACATTTCTACTAAAGTGAATAAATATCTCATTAGTTAT
AGGACTCACTTCTAAAACAGATGCTGCGCTTCTCAAACTGCTGCAACATG
GTTATTATACTCTCTGGACCCCCAGCCCAACCTCTGTTTTGGAAN

Query= MSMg01no261_f18.g1 MSMg01no261_f18.g1 CHROMAT_FILE:
MSMg01no261_f18.g1 PHD_FILE: MSMg01no261_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:44 2005
         (609 letters)



>mm_chr18_44169381_44170389
          Length = 1009

 Score = 1139 bits (589), Expect = 0.0
 Identities = 604/609 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   actttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccgagtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 actttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccgagtgc 874

                                                                       
Query: 61  tgggattaaaggcgtgcaccataacgcctggcttgatgtagcatttctttgtaagctaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 tgggattaaaggcgtgcaccataacgcctggcttgatgtagcatttctttgtaagctaac 814

                                                                       
Query: 121 tttgtaaagtaatgggttggttttagaatgtctgtaactgtctgctacctcatggtcctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tttgtaaagtaatgggttggttttagaatgtctgtaactgtctgctacctcatggtcctt 754

                                                                       
Query: 181 ttatattgtctccaccatgaggaatcctccctcattagaaccacctcgttcactgtggtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ttatattgtctccaccatgaggaatcctccctcattagaaccacctcgttcactgtggtc 694

                                                                       
Query: 241 cagccatgactcccatggatgcatctctattaataaagctcattttctgacaggtagttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cagccatgactcccatggatgcatctctattaataaagctcattttctgacaggtagttt 634

                                                                       
Query: 301 catgccagcttccaagccatcatctatctctccataacatgaacctgccaacttcacata 360
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 633 catgccagcttccaagccatcatctatctctccataacgtgaacctgccaacttcacata 574

                                                                       
Query: 361 ttaatatgtctcaaatattacctccttatcgctcttgtttgtttcagtgtttctcttctc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttaatatgtctcaaatattacctccttatcgctcttgtttgtttcagtgtttctcttctc 514

                                                                       
Query: 421 ttcatcctctttctttttcttttcagcagcttctttttccctgagagaagggattgaaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttcatcctctttctttttcttttcagcagcttctttttccctgagagaagggattgaaag 454

                                                                       
Query: 481 aaacatttctactaaagtgaataaatatctcattagttataggactcacttctaaaacag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaacatttctactaaagtgaataaatatctcattagttataggactcacttctaaaacag 394

                                                                       
Query: 541 atgctgcgcttctcaaactgctgcaacatggttattatactctctggacccccagcccaa 600
            || || ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ttgatgtgctgctcaaactgctgcaacatggttattatactctctggacccccagcccaa 334

                    
Query: 601 cctctgttt 609
           |||||||||
Sbjct: 333 cctctgttt 325


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)