XXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGAATCCGCGGAATTCCTG
ATTTTTTCAAGCCTTTTAATATGAAGGGATGCTGAATTTTGTCAAATGAT
TTTCCAGCATCTAATGAAATGATCATGTAGTTTTTTTCTTTGAGTTTTTT
TACGTAGTGGATTATGTTGATGGAGTTCCATATATTGAACCATCCCTGCA
TCCCTGGGATGAAGCCTACTTGAAGTGTCCTTAGATTCAGATGGCAAAAA
TTTTATTGAGTATTTTTGCATCAATATTGATAAGGGACATTGGTCTGAAG
TTCTCTTTCTTTGTTTGGTATAAGTATAAGCGTAATTGTGGTTTCATAAA
ATGAATTGGATAGTGTTCCTTCTGTTTCTATTTTGTGAAATAGTTTGATG
ATTACTGCCCCCACGTCTTTGAAAGTCTGATAGGATTCTCCACTAAACCC
ATCTGGTCCTGGATTTTTTGGTTGAGAGACTATTAATGACTGCTTCTGCT
TCTTTAAGGGTTATGAAACTGTTTAGATGGCTAACCTGATCCTGTTTTAA
ATTTGGCTCCTGGTATCTGTCTAGAAAATTGTCCATTTCACCCAGATCTT
CTGATTTTGTTATGTATAAGCTTTTGTATTAAGATCTGACGATTAATTTG
AACTCCCTGTCCCCATTGTTCCCTCCCCCCCGTCATTCTTTCCCTTTTCT
ACTTTTCTCCCGTCCCTGTCCCTTTTTCCCTTCTCTTTCTTCTCCTTTCA
TT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXATAAGGGATAGGTGGAGACTGTTAGTAAGCAGTC
CCTTTCACTGGACTGCTCTCAGGGACCTAGCAGCTGTTTATGTCATCACC
TGCCTGTGACATGCACTAGGCTTGTGCTATGCATAAAAGGGCCTCCAGCC
ATCCCAGATCTTTCTCTCTGTCCCTCTCTCTACCCTTTCTGCTTTCTCCC
TCATTCCCTCTGTCTGTCTGTCTGTCTGTCTGTCTGACTGACTGACTGCC
TCTCTCTCCCCATCATGTCCCCATCCTGGGTCAGGTTTTCACTCTCCCCT
TCGCCAAAAAAGCCTTCTTACACTAGATCTGCTGCATGGTGTAATTTCTC
AAGGGTATATTTTGGCTCAGGCCTGCCAAAGCTACCCAGGCCATTGTTTG
CATGTTATGCTATCAGAGACACTTGGCTAGGAGTGAGACAGGTCCCAAAT
ACGTGATACAGCCTATTTGAATTCAACTTCCTTTTCTTGCTGTTTCCATT
TCAAGCAATTAGCTTTTGTGTTAGGCTGTCTTATGTTAATCTATAACTCA
TAAGTAAAAGTACATGAGAGTGGATGGGTGGTCGCCCCTACTCCCCTCAT
TCCATCCCTTTTTTCCTCTTTCCCTATCTTTTTCTTCTTCCCCCTTTTTA
TTCTTCCTTTCCCTCTTCTCTTCTTTCCCCCCTTTTTTTTCCCCCCTTCT
CCCCTCTTCTT

Query= MSMg01no262_m22.g1 MSMg01no262_m22.g1 CHROMAT_FILE:
MSMg01no262_m22.g1 PHD_FILE: MSMg01no262_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:32 2005
         (554 letters)



>mm_chr18_52241506_52242460
          Length = 955

 Score =  948 bits (490), Expect = 0.0
 Identities = 508/516 (98%), Gaps = 5/516 (0%)
 Strand = Plus / Minus

                                                                       
Query: 44  ggactgctctcagggacctagcagctgtttatgtcatcacctgcctgtgacatgcactag 103
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ggactgctctcagggacctagtagctgtttatgtcatcacctgcctgtgacatgcactag 896

                                                                       
Query: 104 gcttgtgctatgcataaaagggcctccagccatcccagatctttctctctgtccctctct 163
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 gcttgtgctatgcataaaagggcctccagccatcccagatctttctctctgtccctctct 836

                                                                       
Query: 164 ctaccctttctgctttctccctcattccc----tctgtctgtctgtctgtctgtctgtct 219
           |||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||
Sbjct: 835 ctaccctttctgctttctccctcattccctctttctgtctgtctgtctgtctgcctgtct 776

                                                                       
Query: 220 gactgactgactgcctctctctccccatcatgtccccatcctgggtcaggttttcactct 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gactgactgactgcctctctctccccatcatgtccccatcctgggtcaggttttcactct 716

                                                                       
Query: 280 ccccttcgcc-aaaaaagccttcttacactagatctgctgcatggtgtaatttctcaagg 338
           |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 715 ccccttcgccaaaaaaagccttcttacactagagctgctgcatggtgtaatttctcaagg 656

                                                                       
Query: 339 gtatattttggctcaggcctgccaaagctacccaggccattgtttgcatgttatgctatc 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gtatattttggctcaggcctgccaaagctacccaggccattgtttgcatgttatgctatc 596

                                                                       
Query: 399 agagacacttggctaggagtgagacaggtcccaaatacgtgatacagcctatttgaattc 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagacacttggctaggagtgagacaggtcccaaatacgtgatacagcctatttgaattc 536

                                                                       
Query: 459 aacttccttttcttgctgtttccatttcaagcaattagcttttgtgttaggctgtcttat 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aacttccttttcttgctgtttccatttcaagcaattagcttttgtgttaggctgtcttat 476

                                               
Query: 519 gttaatctataactcataagtaaaagtacatgagag 554
           ||||||||||||||||||||||||||||||||||||
Sbjct: 475 gttaatctataactcataagtaaaagtacatgagag 440


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 955
Length adjustment: 10
Effective length of query: 544
Effective length of database: 945
Effective search space:   514080
Effective search space used:   514080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)