Query= MSMg01no270_h15.b1 MSMg01no270_h15.b1 CHROMAT_FILE:
MSMg01no270_h15.b1 PHD_FILE: MSMg01no270_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:08 2005
(319 letters)
>mm_chr18_48561214_48561934
Length = 721
Score = 586 bits (303), Expect = e-172
Identities = 313/317 (98%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 5 gaattcattcagttttgataatatctcttgagagacatagcactttgttgtgtcaggaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattcagttttgataatatctcttgagagacatagcactttgttgtgtcaggaaa 264
Query: 65 tagtttcttttaattatggtttgctaccccctttccctttttattgaagtacttaccgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagtttcttttaattatggtttgctaccccctttccctttttattgaagtacttaccgca 324
Query: 125 tgatttgatttttttttttt--gcgtatcaaataacatgttcaacagagtaattagcgtt 182
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 tgatttgattttttttttttttgcgtatcaaataacatgttcaacagagtagttagcgtt 384
Query: 183 tcctacagaactgaaagcaaataatttgaatctccaggtataattaggccaataaattgg 242
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 tcctacagaactgaaagcaaataatttgaatctccagatataattaggccaataaattgg 444
Query: 243 attaggccactgaaaagaatcaggtgaaaactgttcaaaattaatttttttcctaaaatg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attaggccactgaaaagaatcaggtgaaaactgttcaaaattaatttttttcctaaaatg 504
Query: 303 ggttatacaaatcgtct 319
|||||||||||||||||
Sbjct: 505 ggttatacaaatcgtct 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 721
Length adjustment: 9
Effective length of query: 310
Effective length of database: 712
Effective search space: 220720
Effective search space used: 220720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_h15.g1 MSMg01no270_h15.g1 CHROMAT_FILE:
MSMg01no270_h15.g1 PHD_FILE: MSMg01no270_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:08 2005
(672 letters)
>mm_chr18_48733154_48734225
Length = 1072
Score = 1261 bits (652), Expect = 0.0
Identities = 667/672 (99%)
Strand = Plus / Minus
Query: 1 atgaaattcctaagcaaatggatggacctggagggcatcatcctgaccgaggtaacccaa 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1030 atgaaattcctaagcaaatggatggacctggagggcatcatcctgagtgaggtaacccaa 971
Query: 61 tcacaaaagaactcacatgatatgtactcactgataagtggatttgcaaaacacatgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 tcacaaaagaactcacatgatatgtactcactgataagtggatttgcaaaacacatgaaa 911
Query: 121 ctcaaaaagaacgaagaccaaagtatgtgatattttaagacagtgagttataaaaaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 ctcaaaaagaacgaagaccaaagtatgtgatattttaagacagtgagttataaaaaaatc 851
Query: 181 acattattaagaggaacaagatcaatttatttgctgtgtataaaaatattatattgccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 acattattaagaggaacaagatcaatttatttgctgtgtataaaaatattatattgccca 791
Query: 241 gttgggaaaaaagttttatgttgttatgaattatgaatgccctacaaaactattagagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gttgggaaaaaagttttatgttgttatgaattatgaatgccctacaaaactattagagta 731
Query: 301 aaagttttcagcatgtatgatatttactaggaaggcagaatcaggacgaagaaactgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 aaagttttcagcatgtatgatatttactaggaaggcagaatcaggacgaagaaactgaaa 671
Query: 361 gtccaaattcaataaatgtttccaattgcaaggcaccgagcacataaaattattttaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gtccaaattcaataaatgtttccaattgcaaggcaccgagcacataaaattattttaatt 611
Query: 421 ctttgtatgttaattaattaagcgagaaccacacagagattcaacaagttagctgtggaa 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctttgtatgttaattaattaagcaagaaccacacagagattcaacaagttagctgtggaa 551
Query: 481 ttgtcctaaatctagacattcttacactctgactcagatcttttttttttcctccacaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttgtcctaaatctagacattcttacactctgactcagatcttttttttttcctccacaca 491
Query: 541 gcttcaagagtccttactacttcagtcaactcaagaaacaagtgaaccctgctgatcttc 600
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 490 gcttcaagagtccttattacttcagtcaactcaagaaacaagttaaccctgctgatcttc 431
Query: 601 atgctgcctttaatgtgagaatgtaaatggagcaaagaggctacttcatcctttctgaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atgctgcctttaatgtgagaatgtaaatggagcaaagaggctacttcatcctttctgaac 371
Query: 661 ctccaatagtca 672
||||||||||||
Sbjct: 370 ctccaatagtca 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
