Query= MSMg01no270_n15.b1 MSMg01no270_n15.b1 CHROMAT_FILE:
MSMg01no270_n15.b1 PHD_FILE: MSMg01no270_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:36 2005
(338 letters)
>mm_chr18_25841844_25842583
Length = 740
Score = 646 bits (334), Expect = 0.0
Identities = 338/340 (99%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 attttaaaactgaatactctacagtagttaaaaaggtaaaatgatccttaatgtaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttaaaactgaatactctacagtagttaaaaaggtaaaatgatccttaatgtaccaac 260
Query: 61 acagaaagcagcgtcatcagagaggagaaacaaattgtatggtaatggatgccatggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaaagcagcgtcatcagagaggagaaacaaattgtatggtaatggatgccatggata 320
Query: 121 cacagcagaggcatatcccactccttccgtctgtactcttgtctgtatttacaggcaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagcagaggcatatcccactccttccgtctgtactcttgtctgtatttacaggcaaag 380
Query: 181 ttgcaaggagctgaacgcaggagcatgaggtgctgatggggcaagcatccctgtggtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcaaggagctgaacgcaggagcatgaggtgctgatggggcaagcatccctgtggtgat 440
Query: 241 tctacactttttgtttggtttgacacatttagactcagactgtattcacagatcacttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctacactttttgtttggtttgacacatttagactcagactgtattcacagatcacttgc 500
Query: 301 ataattaactttcaaaaaaaaaaaa--gagcccaatctgt 338
||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 ataattaactttcaaaaaaaaaaaaaagagcccaatctgt 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 740
Length adjustment: 9
Effective length of query: 329
Effective length of database: 731
Effective search space: 240499
Effective search space used: 240499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_n15.g1 MSMg01no270_n15.g1 CHROMAT_FILE:
MSMg01no270_n15.g1 PHD_FILE: MSMg01no270_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:36 2005
(664 letters)
>mm_chr18_25977713_25978776
Length = 1064
Score = 1007 bits (521), Expect = 0.0
Identities = 539/545 (98%)
Strand = Plus / Minus
Query: 120 tataaggtctctaggccaggtcttaaccttctgaatgctgtgaccctttgatacatttcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 tataaggtctctaggccaggtcttaaccttctgaatgctgtgaccctttgatacatttcc 1005
Query: 180 tcatgttgtagtttatttcattgctacactaaaatggcaattttgctactgttatgattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 tcatgttgtagtttatttcattgctacactaaaatggcaattttgctactgttatgattt 945
Query: 240 gtaatataaatatcttatatgcaggatgatctgatatgccatccccaaagggattgcaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 gtaatataaatatcttatatgcaggatgatctgatatgccatccccaaagggattgcaac 885
Query: 300 tcacaggttaagagctgctgttttaggcaaaggctcacaactaccttaggctttgtgaac 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 884 tcacaggttaagagctgctgttttaggcaaaggctcacagctaccttaggctttgtgaac 825
Query: 360 cacatacagagaacctcacgccccaaggagtggttatccatcatttgaaggaatatgtct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 cacatacagagaacctcacgccccaaggagtggttatccatcatttgaaggaatatgtct 765
Query: 420 tttccttcaaatatatatggggtatgaagtgcagaattagactttctgaaaatataagca 479
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 764 tttccttcaaatatatatggggtatgaagtgcagaattagactttctgataatataagca 705
Query: 480 gttgaagtcaagttatgggtcaggaaaataaaaaggggagaactgtatgtgtacctaaat 539
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 704 gttgaggtcaagttatgggtcaggaaaataaaaaggggagaaccgtatgtgtacctaaat 645
Query: 540 cattagtggctgcataactatttcttaactagaattgctcagtttgtaacctggttccta 599
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 644 cattagtggctgcataactatttcttaactagaattgctcaatttgtaacctggttccta 585
Query: 600 tgtttatcgtgtagtaaccagggtgcaaggtggttagggtggacactatgatctctgctt 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 584 tgtttatcgtgtagtaaccagggtgcaaggtggttagggtggacactatgatctctactt 525
Query: 660 ttcag 664
|||||
Sbjct: 524 ttcag 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
