Query= MSMg01no271_o06.b1 MSMg01no271_o06.b1 CHROMAT_FILE:
MSMg01no271_o06.b1 PHD_FILE: MSMg01no271_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:52 2005
(294 letters)
>mm_chr18_65771665_65772358
Length = 694
Score = 511 bits (264), Expect = e-149
Identities = 287/296 (96%), Gaps = 4/296 (1%)
Strand = Plus / Minus
Query: 1 aagctaacctgggcctcagagcaagactctgtccctaataagtaaataaacaaacagcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aagctaacctgggcctcagagcaagactctgtccctaataagtaaataaacaaacagcga 246
Query: 61 gggggctaaaaagcacagctcagaggttacaagtaggccgctctgacatggcagctacaa 120
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 245 gggggctaaaaaggacagctcagaggttacaagtaggccgctctgacgtggcagctacaa 186
Query: 121 actgtctgtaactccagtttcagaggatccagcctctgacttacacaggcaccaggcaca 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 actgtctgaaactccagtttcagaggatccagcctctgacttacacaggcaccaggcaca 126
Query: 181 gacatggtgcacaaatacacacacagacaaacatccatacgcatcaagtataagcaagca 240
|||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 125 gacatggtgcacaaat--acacacagacaaacatccatacacatcaagtaaaagcaagca 68
Query: 241 acaggagtaacagtgtaccttttaaaaagggatg--gactaagggtctttgatgga 294
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 67 acaggagtaacagtgtaccttttaaaaagggatggagactaagggtctttgatgga 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no271_o06.g1 MSMg01no271_o06.g1 CHROMAT_FILE:
MSMg01no271_o06.g1 PHD_FILE: MSMg01no271_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:52 2005
(523 letters)
>mm_chr18_65615518_65616440
Length = 923
Score = 973 bits (503), Expect = 0.0
Identities = 518/523 (99%)
Strand = Plus / Plus
Query: 1 agacagaaggatctagagagtcgttaaaagatcgaatgctccagagtaccaggaagtcag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 agacagaaggatctagagagtcgttaaaagatcgaatgctccagagtaacaggaagtcag 260
Query: 61 actgaactgcactaatcagattttatgctaaatcctcactctttataaaaattcaaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgaactgcactaatcagattttatgctaaatcctcactctttataaaaattcaaagac 320
Query: 121 ttaacaattacttaatagcacttagaaatactagacccttttctaggtgcttgggagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaacaattacttaatagcacttagaaatactagacccttttctaggtgcttgggagtat 380
Query: 181 gagctctttttggataagtaacttagatccattaaacatgcaattgatgatatagcactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagctctttttggataagtaacttagatccattaaacatgcaattgatgatatagcactg 440
Query: 241 tgccagtttttgaagagtacactactttaagttctggaaaatgtctaggatcgtctagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgccagtttttgaagagtacactactttaagttctggaaaatgtctaggatcgtctagta 500
Query: 301 agcatatttctaaagtttttgttgttgttgttcttttgcatactaaaatagtatttttat 360
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 agtatatttctaaagtttttgttgttgttgttcttttgtatactaaaatagtatttttat 560
Query: 361 ttctttgttttcttttacttgatgctagggattgaacccagatcatcatacatgctaagc 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctttgttttctttttcttgatgctagggattgaacccagatcatcatacatgctaagc 620
Query: 421 atgcacttaaccactaagctatactcccaggcccatgttccctcttccaatagatgactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcacttaaccactaagctatactcccaggcccatgttccctcttccaatagatgactt 680
Query: 481 gtgttcaagaatttgtggctgctcttacagtacaagattttat 523
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 gtgttcaagaatttgtggctgctcttacagtaaaagattttat 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
