Query= MSMg01no272_a02.b1 MSMg01no272_a02.b1 CHROMAT_FILE:
MSMg01no272_a02.b1 PHD_FILE: MSMg01no272_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:01 2005
(320 letters)
>mm_chr18_71847607_71848327
Length = 721
Score = 559 bits (289), Expect = e-164
Identities = 310/317 (97%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 5 gaattcactcatggtttcaagcatttatatatttatataacttattgttttctctttatt 64
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactcatggcttcaagcatttttatatttatataacttattgttttctctttatt 264
Query: 65 aatatgttttaaataaaacaaaattgtataatctcattttttaggtttgtaacaaacatt 124
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 aatatgttttaaataaaacaaaattgtataatctcattttttaggtctgtaacaaacatt 324
Query: 125 attttaaagcattttt-attatacaaaattaattttttcagtgttatttggagtttaaga 183
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attttaaagcattttttattatacaaaattaattttttcagtgttatttggagtttaaga 384
Query: 184 ggttttatacattttaaagatttgtcatagctctttgaaatgacaaataacttcttttta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggttttatacattttaaagatttgtcatagctctttgaaatgacaaataacttcttttta 444
Query: 244 ataaatattttatctttaaaaaatgtaattaaaatacaattacattttccctccattctc 303
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 445 ataaatattttatctttaaaaaatataattaaaatacaattatattttccctccattctc 504
Query: 304 caacgtcttccaggtcc 320
||| |||||||||||||
Sbjct: 505 caatgtcttccaggtcc 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_a02.g1 MSMg01no272_a02.g1 CHROMAT_FILE:
MSMg01no272_a02.g1 PHD_FILE: MSMg01no272_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:01 2005
(302 letters)
>mm_chr18_71997302_71998003
Length = 702
Score = 555 bits (287), Expect = e-162
Identities = 293/295 (99%)
Strand = Plus / Minus
Query: 1 ttgtttggtgtgcatttgatccataaaataaggaacatgaatcttgggaccataaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttgtttggtgtgcatttgatccataaaataaggaacatgaatcttgggaccataaacatc 436
Query: 61 tcagatttctgagttatttcatattttgatatatttacatatgttcaatgagaactctta 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcagatttctgagttatttcagattttgatatatttacatatgttcaatgagaactctta 376
Query: 121 acattgtggcaaatatgaacacaaaatccagtcatgtatcatataaaacatgcttcatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acattgtggcaaatatgaacacaaaatccagtcatgtatcatataaaacatgcttcatgc 316
Query: 181 acatacttatgaggtatggtcatataaatgcttttaataattttattcaccaggccaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 acatacttatgaggtatggtcatataaatgcttttaataattttattcaccaggccaggt 256
Query: 241 gccatttatttgcatattgatatatgtcagtgtttgaaagttttatatatatata 295
||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 255 gccatttatttgcatattgatatatgtcagtgtttgaaagttttatatacatata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
