Query= MSMg01no272_b17.b1 MSMg01no272_b17.b1 CHROMAT_FILE:
MSMg01no272_b17.b1 PHD_FILE: MSMg01no272_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:09 2005
(321 letters)
>mm_chr18_58475353_58476073
Length = 721
Score = 567 bits (293), Expect = e-166
Identities = 312/319 (97%), Gaps = 4/319 (1%)
Strand = Plus / Plus
Query: 5 gaattcaaatcagttccacatgccggtgctccccttgctgtttatcttgcttttgattca 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaatcagttccaaatgccggtgctccccttgctgtttatcttgcttttgattca 264
Query: 65 ccggttag-aaaaaaatgcctgtatgaatataaaaaaaaaatggtttcccaaatctctcg 123
|||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 265 ccggttaggaaaaaaatggctgtatgaatataaaaaaaa--tggtttcccaaatctctcg 322
Query: 124 attctcaaatatgctgtgttgtgactgctgcctagctaagtctaatggcattt-caatga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 323 attctcaaatatgctgtgttgtgactgctgcctagctaagtctaatggcattttcaatga 382
Query: 183 tatcttcgttgcattattagcaattgttgcttctgtctacttcccattagcatccagtta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tatcttcgttgcattattagcaattgttgcttctgtctacttcccattagcatccagtta 442
Query: 243 gacatgccaagttgtccactgttaataaatgggagaacgtttactttctatggataggga 302
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 443 gacatgccaagttgtccactgttaatgaatgggagaacgtttactttctatggataggga 502
Query: 303 cacatttcttcctcaagat 321
|||||||||||||||||||
Sbjct: 503 cacatttcttcctcaagat 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_b17.g1 MSMg01no272_b17.g1 CHROMAT_FILE:
MSMg01no272_b17.g1 PHD_FILE: MSMg01no272_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:09 2005
(293 letters)
>mm_chr18_58659435_58660127
Length = 693
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Minus
Query: 1 aataatgaaggggttgaagaaaattcccacgcgtttttctacccagaacccaccacttag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 491 aataatgaaggggttgaagaaaattcccacgagtttttctacccagaacccaccacttag 432
Query: 61 cacagaagtagaatttcttgtgtgaataagcaaatgtagcccggattattgtactcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cacagaagtagaatttcttgtgtgaataagcaaatgtagcccggattattgtactcaaat 372
Query: 121 caccagcaaatcagaatttgggaattagaaagctaaggatctacgacatgtataagaacg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 371 caccagcaaatcagaatttgggaattagaaagctaagaatctacgacatgtataagaacg 312
Query: 181 gacagatgccaaaacacatgaggaatttccatgaggtggaagactctgtaccttctagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gacagatgccaaaacacatgaggaatttccatgaggtggaagactctgtaccttctagtg 252
Query: 241 agtcctaaccaaatgcagaaattcataacaccaaacagaacaaacaaaaca 291
||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 251 agtcctaaccaaatgcagaaattcatagcaccaaacagaacaaacaaaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
