Query= MSMg01no273_d24.b1 MSMg01no273_d24.b1 CHROMAT_FILE:
MSMg01no273_d24.b1 PHD_FILE: MSMg01no273_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:35 2005
(322 letters)
>mm_chr18_64126976_64127698
Length = 723
Score = 576 bits (298), Expect = e-169
Identities = 312/320 (97%), Gaps = 7/320 (2%)
Strand = Plus / Minus
Query: 4 ggaattctgcttat----attactcttcacaaattttaagtattgaagaaagaaaaatga 59
|||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattctgcttataaaaat---tcttcacaaattttaagtattgaagaaagaaaaatga 464
Query: 60 cagaatggctagttcctgaagcccggcggtgcttgagttttcgtctctgactactttagt 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 463 cagaatggctagttcctgaagcccggtggtgcttgagttttcgtctctgactactttagt 404
Query: 120 cagtttgcacatggcccctcaccagtgtctcatcagtatttaccgtttatgtgatgtctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cagtttgcacatggcccctcaccagtgtctcatcagtatttaccgtttatgtgatgtctc 344
Query: 180 agcagatctaaacagtggaaagataaagttgtagtaaaaatgtatattttacttacacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agcagatctaaacagtggaaagataaagttgtagtaaaaatgtatattttacttacacaa 284
Query: 240 ataagataatggctgacgttttaaaagtgaggctcctggcactgattgtaggaactgttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ataagataatggctgacgttttaaaagtgaggctcctggcactgattgtaggaactgttt 224
Query: 300 agaatgtgaactgtgcttcc 319
||||||||||||||||||||
Sbjct: 223 agaatgtgaactgtgcttcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 723
Length adjustment: 9
Effective length of query: 313
Effective length of database: 714
Effective search space: 223482
Effective search space used: 223482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_d24.g1 MSMg01no273_d24.g1 CHROMAT_FILE:
MSMg01no273_d24.g1 PHD_FILE: MSMg01no273_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:35 2005
(291 letters)
>mm_chr18_63968731_63969421
Length = 691
Score = 509 bits (263), Expect = e-148
Identities = 284/291 (97%)
Strand = Plus / Plus
Query: 1 tggatgagcatgaatacaattttatgcatgtaatctttgaataattattttcccatttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggatgagcatgaatacaattttatgcatgtaatctttgaataattattttcccatttat 260
Query: 61 tcattaattaatatttacgttgttcccactaaatagaagtgtatatacttactactatat 120
| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 taatgaattaatatttacgttgttcccactaaatagacgtgtatatacttactactatat 320
Query: 121 gtattactgttgtgaacttaggtgtctactctttcattacaatcttgcttttaattattt 180
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtattactgctatgaacttaggtgtctactctttcattacaatcttgcttttaattattt 380
Query: 181 tggaactatattggaaagaagaatttattggattatagtatagatctgtttttgtttttt 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tggaactatattggaaagaagaatttattggattatagggtagatctgtttttgtttttt 440
Query: 241 aaagaaaccttatattttctgtaacaattatactttacattctcaccagta 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagaaaccttatattttctgtaacaattatactttacattctcaccagta 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
