Query= MSMg01no277_n10.b1 MSMg01no277_n10.b1 CHROMAT_FILE:
MSMg01no277_n10.b1 PHD_FILE: MSMg01no277_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:02 2005
(149 letters)
>mm_chr18_58921066_58921614
Length = 549
Score = 273 bits (141), Expect = 4e-78
Identities = 147/149 (98%)
Strand = Plus / Plus
Query: 1 cactcactctgggatctgcggaactacctttccaaagcgttcttatccagggtagcacca 60
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactcactctgggatctgcaaaactacctttccaaagcgttcttatccagggtagcacca 260
Query: 61 caggattgattggttaggaagcttagctcccctttttcttacatggagtgggtctggtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggattgattggttaggaagcttagctcccctttttcttacatggagtgggtctggtta 320
Query: 121 tatgggaggtaggaagtgtgtatgtgtga 149
|||||||||||||||||||||||||||||
Sbjct: 321 tatgggaggtaggaagtgtgtatgtgtga 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_n10.g1 MSMg01no277_n10.g1 CHROMAT_FILE:
MSMg01no277_n10.g1 PHD_FILE: MSMg01no277_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:02 2005
(234 letters)
>mm_chr18_59046849_59047482
Length = 634
Score = 377 bits (195), Expect = e-109
Identities = 232/265 (87%), Gaps = 32/265 (12%)
Strand = Plus / Minus
Query: 1 tatttgaaaaaacagggaatgtccttgtcctgggatctgctactgattaaatactctata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tatttgaaaaaacagggaatgtccttgtcctgggatctgctactgattaaatactctata 331
Query: 61 ccggctccctgatatttttattccaataattatgacacatgtgccgaatataagtgccca 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cctgctccctgatatttttattccaataattatgacacatgtgccgaatataagtgccca 271
Query: 121 aacattacatttcttgttcctctatcagcacactaagtatagcttggaatatatatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aacattacatttcttgttcctctatcagcacactaagtatagcttggaatatatatatat 211
Query: 181 atg--------------------------------tatatattctgttaaattttgtttg 208
||| |||||||||||||||||||||||||
Sbjct: 210 atgtatatatatatatatatatatatatatatatatatatattctgttaaattttgtttg 151
Query: 209 gctaaggattaaaaaactataatat 233
|||||||||||||||||||||||||
Sbjct: 150 gctaaggattaaaaaactataatat 126
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
