Query= MSMg01no277_o15.b1 MSMg01no277_o15.b1 CHROMAT_FILE:
MSMg01no277_o15.b1 PHD_FILE: MSMg01no277_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:07 2005
(371 letters)
>mm_chr18_75418512_75419282
Length = 771
Score = 702 bits (363), Expect = 0.0
Identities = 369/371 (99%)
Strand = Plus / Minus
Query: 1 ccgcccttagctttcagttcccaggacacactctgggaacgtgtttcctcttgtgggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ccgcccttagctttcagttcccaggacacactctgggaacgtgtttcctcttgtgggagt 512
Query: 61 acatgctcctaaacatgactgtgagtgcagccgagatcacatgaaaaatattatgttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 acatgctcctaaacatgactgtgagtgcagccgagatcacatgaaaaatattatgttttt 452
Query: 121 aactctgagtctggaagacatattaaggaaactctgcgtgctgttcttcttctagacaca 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 451 aactctgagtctggaagacatattaaggaaactctgcgtgctgttcctcttctagacaca 392
Query: 181 caagtcacttccgacttctgatttactcctcgtgctgcagagaccatgcccaaaacgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caagtcacttccgacttctgatttactcctcgtgctgcagagaccatgcccaaaacgaac 332
Query: 241 tccaggaacgtgtgttgaaacacgcagtcgttcaagtaattcacagctctgttcccgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tccaggaacgtgtgttgaaacacgcagtcgttcaagtaattcacagctctgttcccgcag 272
Query: 301 caactgctgggctgtttgtttagaggcagtggtaatgcaaaatgatttctccggagacat 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 271 caactgctgggctgtttgtttagaggcagcggtaatgcaaaatgatttctccggagacat 212
Query: 361 ctggcttttat 371
|||||||||||
Sbjct: 211 ctggcttttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_o15.g1 MSMg01no277_o15.g1 CHROMAT_FILE:
MSMg01no277_o15.g1 PHD_FILE: MSMg01no277_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:07 2005
(378 letters)
>mm_chr18_75289861_75290642
Length = 782
Score = 712 bits (368), Expect = 0.0
Identities = 377/382 (98%), Gaps = 4/382 (1%)
Strand = Plus / Plus
Query: 1 aaaaaaacgggaaataaatttacacagttcgttcagttgccatgctgtggacatacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaaaacgggaaataaatttacacagttcgttcagttgccatgctgtggacatacacag 260
Query: 61 gtttaaaagcaagaagtaaaatgagctggagacttggggaggacctcaaatgttcaacat 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttaaaagcaagaagtaagatgagctggagacttggggaggacctcaaatgttcaacat 320
Query: 121 agcagtgaaggaatgaattgtagatgggactgagacaaagaagctatggcttcatagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagtgaaggaatgaattgtagatgggactgagacaaagaagctatggcttcatagagt 380
Query: 181 gaccctcattcagtgatcacgtcagaacaggcagattggagccagttcccagtgctgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaccctcattcagtgatcacgtcagaacaggcagattggagccagttcccagtgctgctg 440
Query: 241 ctgccgctgctgcctgtctgagctctgtatctgagtggctgctctggacagtgcatcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgccgctgctgcctgtctgagctctgtatctgagtggctgctctggacagtgcatcctt 500
Query: 301 gtgatgtaggaaggcgctcactctgcaaaactcagcgccatcttcagatgctttg----c 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gtgatgtaggaaggcgctcactctgcaaaactcagcgccatcttcagatgctttgtctgc 560
Query: 357 acagtgaagtctgggtcttgaa 378
||||||||||||||||||||||
Sbjct: 561 acagtgaagtctgggtcttgaa 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 782
Length adjustment: 9
Effective length of query: 369
Effective length of database: 773
Effective search space: 285237
Effective search space used: 285237
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
