CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATACATCTCCATATGCCTGGCCAGCAGATGTATATTTAAATACGTG
GCCTCATGTGAATTGTTGGCCCTCTGTTTTGTAATGAGGAAACTAAAAGC
AAAGGGATTTTATAATTTTCTCAGCACCCTAAAGTTAGCAGAAGAGCCTG
ATTAATTCTATTTCTGACCTAAATTTCTATGACCAGCTACCATTATTATT
CTTTTCAGGTGTGGATTAAATAACAGCTGCCTTTTATGTTTGCTTGGGTG
TTGGTAAAGGTAGGAAGGGTCAAAACGACCCCCCCCAACCCCCCACACCA
AGTGAGCACCTTTTCCATAGGTGATATCTTTAGGAATGACAAATATATTC
CACAAAACTCTCCCACATTTCTGGATCATACCGAGTTGAGTTGCAGACTT
AAGAAAAGCACATGATCTTTTTAAAGACTTGGATTTCAAAAGAGGAAGAA
TCTTGGTATTTAACCCCTGGGCAAGGCAGTGTGAAGGATTGTGGGATGTC
CTGACTAACGTCTATAATGTGTCCTGTTGGTGCCTATCACCAACATGATG
GGCACCTCTGCTTTCTCCAGCGTTTTGGAAGAGTGTAGAACATAATCTCG
TTGTGTTGACCTGGTCCTCCAGAAATCTATTTATTTAAGCCAGCAGATCA
CAAGCAGAGAGGAAAAACAAAAAATCACCCCCACAN

CGAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTTACAAAAGAAATTCGGAGAGATGGGGCTTTCTCTTTAAT
CCACCTTCATCTGTCTGCTCCCCAACATCTCCATCCAGGCTACCATCCAG
CTGGAGATTAGACAGATTTGAAAGGAGAGCAGCCTTGAGCTTCAGGAAAG
CCCAAATCACAAACACACAGAGCAGCAAGGCCACCTCAAGTGGGAACTCC
TGCTCCCACCTCTCACATATCCTATAGCCTGAGCGGTCCCTACCTTTCCT
GCCAGACTTGGGCTGAACTCTTTTATGAACTCTCCAGAGTAGGACTGTGG
TAAACATACTCTTGTTGTTGGCCCCCCCCCCCCCGATGTAACCAGGATTC
TCTCCAATGCCTGGGGAAATCGAGGGATGAAAAGAGACATGCACATTTGG
ATATACCAGGCTTGAAGGTAAATAGACTAAGTGTTGTTCGTGAACAGCGT
TGTATTCAGTGACGCCCAATGCTCAGTAGAAAGACTCTCAGCTAAGGCAC
AGCATGTCTCCACTGTCTCCTGGGCAAGTAAAGAAAACACGCGCTTTAAG
ATCAGAAAAACCTGAGCTCCACTTCTGGCTTCAGCATTTGCCGGCTTTGT
GACTCAGGACCTTGGTTTTCTTGTCTGTGAAATGGGGATGTGGGTACTTC
CTCTAACATGGCTGCAAGAATGCCTGTAAAGCACGGAG

Query= MSMg01no278_h15.b1 MSMg01no278_h15.b1 CHROMAT_FILE:
MSMg01no278_h15.b1 PHD_FILE: MSMg01no278_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:49 2005
         (333 letters)



>mm_chr18_56993152_56993884
          Length = 733

 Score =  621 bits (321), Expect = 0.0
 Identities = 330/333 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatctttaggaatgacaaatatattccacaaaactctcccacatttctggatcataccga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatctttaggaatgacaaatatattccacaaaactctcccacatttctggatcataccga 260

                                                                       
Query: 61  gttgagttgcagacttaagaaaagcacatgatctttttaaagacttggatttcaaaagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgagttgcagacttaagaaaagcacatgatctttttaaagacttggatttcaaaagag 320

                                                                       
Query: 121 gaagaatcttggtatttaacccctgggcaaggcagtgtgaaggattgtgggatgtcctga 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gaagaatcttggtatttaacccctgggcaaggcagtgtgacggattgtgggatgtcctga 380

                                                                       
Query: 181 ctaacgtctataatgtgtcctgttggtgcctatcaccaacatgatgggcacctctgcttt 240
           ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 ctaacatctataatgtgtcctgttggtgcctatcaccaacgtgatgggcacctctgcttt 440

                                                                       
Query: 241 ctccagcgttttggaagagtgtagaacataatctcgttgtgttgacctggtcctccagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctccagcgttttggaagagtgtagaacataatctcgttgtgttgacctggtcctccagaa 500

                                            
Query: 301 atctatttatttaagccagcagatcacaagcag 333
           |||||||||||||||||||||||||||||||||
Sbjct: 501 atctatttatttaagccagcagatcacaagcag 533


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space:   234576
Effective search space used:   234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no278_h15.g1 MSMg01no278_h15.g1 CHROMAT_FILE:
MSMg01no278_h15.g1 PHD_FILE: MSMg01no278_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:49 2005
         (282 letters)



>mm_chr18_57153913_57154594
          Length = 682

 Score =  530 bits (274), Expect = e-155
 Identities = 280/282 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgcacatttggatataccaggcttgaaggtaaatagactaagtgttgttcgtgaacag 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 catgcacatttagatataccaggcttgaaggtaaatagactaagtgttgttcgtgaacag 274

                                                                       
Query: 61  cgttgtattcagtgacgcccaatgctcagtagaaagactctcagctaaggcacagcatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cgttgtattcagtgacgcccaatgctcagtagaaagactctcagctaaggcacagcatgt 214

                                                                       
Query: 121 ctccactgtctcctgggcaagtaaagaaaacacgcgctttaagatcagaaaaacctgagc 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 213 ctccactgtctcctgggcaagtaaagaaaacacgcactttaagatcagaaaaacctgagc 154

                                                                       
Query: 181 tccacttctggcttcagcatttgccggctttgtgactcaggaccttggttttcttgtctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tccacttctggcttcagcatttgccggctttgtgactcaggaccttggttttcttgtctg 94

                                                     
Query: 241 tgaaatggggatgtgggtacttcctctaacatggctgcaaga 282
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  tgaaatggggatgtgggtacttcctctaacatggctgcaaga 52


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space:   183729
Effective search space used:   183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)