Query= MSMg01no278_p06.b1 MSMg01no278_p06.b1 CHROMAT_FILE:
MSMg01no278_p06.b1 PHD_FILE: MSMg01no278_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:26 2005
(253 letters)
>mm_chr18_65431851_65432504
Length = 654
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 9 tcatggttgtttgtttgcttctaaagtcaggcatggtagcttgcacttgggattccagta 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tcatggttgtttgtttgcttctaaagtcaggcatggtagcttgcacttgggattccagta 368
Query: 69 gcagggggagggggcagaaataggaagatctcttcaatttggtcagttccaggcccttga 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gcagggggagggggcagaaataggaagatctcttcaatttggtcagttccaggcccttga 308
Query: 129 gagacctttgagaggtgcgatgagacctctcaaaaacaaacaaacaaaaatgaaagtggc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gagacctttgagaggtgcgatgagacctctcaaaaacaaacaaacaaaaatgaaagtggc 248
Query: 189 cagcacatgaagaataactatgaggctgt-ccctgtcctacacacacacacacacacaca 247
|| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 247 caacacatgaagaataactatgaggctgtcccctgtcctacacacacacacatacacaca 188
Query: 248 cacaca 253
||||||
Sbjct: 187 cacaca 182
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 654
Length adjustment: 9
Effective length of query: 244
Effective length of database: 645
Effective search space: 157380
Effective search space used: 157380
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no278_p06.g1 MSMg01no278_p06.g1 CHROMAT_FILE:
MSMg01no278_p06.g1 PHD_FILE: MSMg01no278_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:26 2005
(246 letters)
>mm_chr18_65277036_65277681
Length = 646
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Plus
Query: 1 attcaataagacagaatgcttgacttgccgacagatagagggcaaagtgccactctttga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attcaataagacagaatgcttgacttgccgacagatagagggcaaagtgtcactctttga 260
Query: 61 taaaccagggaacagaagtgaatttatgtaaaagaagtgcccgaagagaaaggagatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaccagggaacagaagtgaatttatgtaaaagaagtgcccgaagagaaaggagatgca 320
Query: 121 gtttctctcctgatgtgtgcttccttcatggagagatcatagcaagaagttactgtcata 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 gtttctctcctgatgtgtgcttccttcgtggagagatcatagcaagaagttactgtcata 380
Query: 181 gtcctagagtagaccctagttcacaagacgacattggtcctcacgatcctgagttccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcctagagtagaccctagttcacaagacgacattggtcctcacgatcctgagttccctt 440
Query: 241 ctgca 245
|||||
Sbjct: 441 ctgca 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
