Query= MSMg01no280_i15.b1 MSMg01no280_i15.b1 CHROMAT_FILE:
MSMg01no280_i15.b1 PHD_FILE: MSMg01no280_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:24 2005
(580 letters)
>mm_chr18_36706567_36707541
Length = 975
Score = 1036 bits (536), Expect = 0.0
Identities = 567/580 (97%), Gaps = 5/580 (0%)
Strand = Plus / Minus
Query: 1 tccacaggtgcagactggagacagaagtcttaaatggctgatatgaagggttgggaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tccacaggtgcagactggagacagaagtcttaaatggctgatatgaagggttgggaggcc 716
Query: 61 ctaataactctatatacagctgcaggtctttcatctgaagatttcaaacaatgttatagg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 715 ctaataactctatatacagctgcaggtctttcatctgaaggtttcaaacaatgttatagg 656
Query: 121 cattaattaatttttgcagcacacaagactaaaattccatgctcttggccctgttttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cattaattaatttttgcagcacacaagactaaaattccatgctcttggccctgttttatt 596
Query: 181 gacagaaaatggtagcctctgttgtacaatcatctggcatgattgaatgatgaatgatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gacagaaaatggtagcctctgttgtacaatcatctggcatgattgaatgatgaatgatgt 536
Query: 241 gggcagtggagggcatcctgggtgtgtgaagtgctaagtgaatgtgtgcgcgccgacatg 300
|||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||
Sbjct: 535 gggcagtggagggcatcctgggtgtgtgaagtgctaagtgaatgtgtgtgtgttgacatg 476
Query: 301 gtcccagtctcaaactcagagggaaatagcaaagcctctccctgccctgctggggtgagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gtcccagtctcaaactcagagggaaatagcaaagcctctccctgccctgctggggtgagg 416
Query: 361 cccagagaaatgccttcctagtggacccaagcttagacagacagtgtgtgcagaaaatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cccagagaaatgccttcctagtggacccaagcttagacagacagtgtgtgcagaaaatgt 356
Query: 421 ccgtcgtagctttctcctcccagatattttatggcgtgaacactgttcccctaccaagtc 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 355 ccgtcgtagctttctcctcccagatattttatggcgtgaagactgttcccctaccaagtc 296
Query: 481 tgctcctatgaagattagctaaatccatctcctagatccatctgtattccataaacattc 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgctcctatgaaga-----taaatccatctcctagatccatctgtattccataaacattc 241
Query: 541 acctccttcttgtttatctctagggaataactctgctcac 580
||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 240 acctccttcttgtttatctatagggaataaccctgctcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 975
Length adjustment: 10
Effective length of query: 570
Effective length of database: 965
Effective search space: 550050
Effective search space used: 550050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_i15.g1 MSMg01no280_i15.g1 CHROMAT_FILE:
MSMg01no280_i15.g1 PHD_FILE: MSMg01no280_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:24 2005
(291 letters)
>mm_chr18_36549164_36549854
Length = 691
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%)
Strand = Plus / Plus
Query: 1 acctttgttttattttggtttttgtttgattgtttattgagacagggccccactatatag 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 acctttgttttattttggtttttgtttgattgtttattgagacagggcctcactatatag 260
Query: 61 ctttgattgtcctggaactcactttgtagaccaggctggcactgaactcacaagtactgg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgattatcctggaactcactttgtagaccaggctggcactgaactcacaagtactgg 320
Query: 121 aattaaaggtatgcgtcaccatgcccatcccttaagggagttcattcttaatagccagtt 180
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaaaggtatgagtcatcatgcccatcccttaagggagttcattcttaatagccagtt 380
Query: 181 ccagcacagagaggtggggaagggttaggattttgtgaacctgatttaggggagagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagcacagagaggtggggaagggttaggattttgtgaacctgatttaggggagagagga 440
Query: 241 gtcctggttctgtggtttgcctctgggcaggagttaggagccaaggactgt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcctggttctgtggtttgcctctgggcaggagttaggagccaaggactgt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
