Query= MSMg01no288_h20.b1 MSMg01no288_h20.b1 CHROMAT_FILE:
MSMg01no288_h20.b1 PHD_FILE: MSMg01no288_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:35 2005
(317 letters)
>mm_chr18_74162379_74163094
Length = 716
Score = 555 bits (287), Expect = e-162
Identities = 305/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 5 gaattccatcatgctcacggcttccaggctcagcatctgatcgccttgggaggccaaggg 64
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattccatcatgctcatggcctccaggctcagcatctgatcgccttgggaggccaaggg 455
Query: 65 ctggcaggccttacacgactggaaaagctttccactgtagtttgatctcacctcccagga 124
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ctggcaggccttaga-gactggaaaagctttccactgtagtttgatctcacctcccagga 396
Query: 125 agcctaacccttgaagtcttttcagggtcctggcagttccctaggatctgtgcagcacgc 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aacctaacccttgaagtcttttcagggtcctggcagttccctaggatctgtgcagcacgc 336
Query: 185 tgtcctataatcttacagcaaggctggaagcttgcacccagtgatttggggacccgtggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtcctataatcttacagcaaggctggaagcttgcacccagtgatttggggacccgtggt 276
Query: 245 cttatttaattttattcttaactattcttgagatatgtttgtctgaagaagagactgagg 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 275 cttatttaattttattcttaactattcttgagatacgtttgtctgaagaagagactgagg 216
Query: 305 gtcagagaatg 315
|||||||||||
Sbjct: 215 gtcagagaatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_h20.g1 MSMg01no288_h20.g1 CHROMAT_FILE:
MSMg01no288_h20.g1 PHD_FILE: MSMg01no288_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:35 2005
(287 letters)
>mm_chr18_73983330_73984014
Length = 685
Score = 487 bits (252), Expect = e-142
Identities = 278/288 (96%), Gaps = 4/288 (1%)
Strand = Plus / Plus
Query: 1 agaacttccccagagacttgtctcaatgccagtgtgttcacttgagccatgagtcatgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaacttccccagagacttgtctcaatgccagtgtgttcacttgagccatgagtcatgtc 260
Query: 61 ggggcctcactaggcccagtgaataacagggaaggctctgggtgtccgaaaggaagaagg 120
||||||||| |||||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 261 ggggcctcattaggcccagtgaat---agggagggctctgactgtccgaaaggaagaagg 317
Query: 121 acatccacattctgctgcacttgaacgaaaattatacttgcattgcacagaataggatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 318 acatccacattctgctgcacttgaacgaaaattatacttgcattgcacagactaggatta 377
Query: 181 aatgattagtcctaaaaaaaaa-gaactccaccttgcagaaagggtagttagtgcacaat 239
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 378 aatgattagtcctaaaaaaaaaagaactccaccttgcagaaagggtagttagtgcacaat 437
Query: 240 gctggagactgcttggttgagcaaagtgggttcgtgtcacgtcaggcc 287
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 438 gctggagactgcgtggttgagcaaagtgggttcgtgtcacgtcaggcc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 685
Length adjustment: 9
Effective length of query: 278
Effective length of database: 676
Effective search space: 187928
Effective search space used: 187928
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
