Query= MSMg01no288_l01.b1 MSMg01no288_l01.b1 CHROMAT_FILE:
MSMg01no288_l01.b1 PHD_FILE: MSMg01no288_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:49 2005
(311 letters)
>mm_chr18_46731284_46731992
Length = 709
Score = 549 bits (284), Expect = e-161
Identities = 302/308 (98%), Gaps = 2/308 (0%)
Strand = Plus / Plus
Query: 4 agcagcagcaacaacaataacaacagctgcggcagcaacaacccaactgtatagaataaa 63
|||||||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||
Sbjct: 204 agcagcagcagcaacaataacaacagctgtggcagcaacaacccaactgaa-agaataaa 262
Query: 64 ggcaataagattcctagggttggcaacatggctcagaggtgggtcacatacacaaggctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggcaataagattcctagggttggcaacatggctcagaggtgggtcacatacacaaggctc 322
Query: 124 catccccagtgctagcagaaagtaacaacagttcctggattgtgactttacatgaatggc 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catccc-agtgctagcagaaagtaacaacagttcctggattgtgactttacatgaatggc 381
Query: 184 agcaatttttactgagctatggacagttattaaaagagagcagaagagagagggctgact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agcaatttttactgagctatggacagttattaaaagagagcagaagagagagggctgact 441
Query: 244 gcgttgtctgtaatattaatagttctgtttgcataaattaaaacatccatcagattgcta 303
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 442 gcgttgtctgtaatattaatagttctgtttgcataaattaaaacatccctcagattgcta 501
Query: 304 tatgggca 311
||||||||
Sbjct: 502 tatgggca 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 709
Length adjustment: 9
Effective length of query: 302
Effective length of database: 700
Effective search space: 211400
Effective search space used: 211400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_l01.g1 MSMg01no288_l01.g1 CHROMAT_FILE:
MSMg01no288_l01.g1 PHD_FILE: MSMg01no288_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:49 2005
(239 letters)
>mm_chr18_46928392_46929030
Length = 639
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Minus
Query: 1 ataaacacaagaattgtcatctctttctttactgggaaggtatacagggaaacaaaaccc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 439 ataaacacaagaattgtcatctctttctttactgggaaagtatacagggaaacaaaaccc 380
Query: 61 tggctaggtggtcttcagaggtacaggacagacagttgaggagctggagtcatggttact 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 379 tggctaggtggtcttcagaggtacaggacagacaactgaggagctggagtcatggttact 320
Query: 121 gcaggctcaaacttcctttgaagtctctgcttagagttctaaatcaactttatcctatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcaggctcaaacttcctttgaagtctctgcttagagttctaaatcaactttatcctatat 260
Query: 181 gtttatctgaaaattatcatttttttccaccactaccactaatttaggataaaaggaat 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtttatctgaaaattatcatttttttccaccactaccactaatttaggataaaaggaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
