Query= MSMg01no288_p10.b1 MSMg01no288_p10.b1 CHROMAT_FILE:
MSMg01no288_p10.b1 PHD_FILE: MSMg01no288_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:10 2005
(325 letters)
>mm_chr18_77244128_77244851
Length = 724
Score = 561 bits (290), Expect = e-164
Identities = 312/320 (97%), Gaps = 3/320 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggccaggggtatagagtacacaaaacttggaagactgggtcctgtccccacc 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 522 gaattccaggccaggggtatagagtacacaaaacttggaagactgggtcctgtcaccacc 463
Query: 65 accctgtccagcaatgcatgacgtacattaatgcacagtccgatcattcctagtaaatac 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 accctgtccagcaatggatgacgtacattaatgcacagtccgatcattcctagtaaatac 403
Query: 125 ttctcattaaagtggagctccttgcggagggcctggggggaggggagatagacataggac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttctcattaaagtggagctccttgcggagggcctggggggaggggagatagacataggac 343
Query: 185 cacagcatcttaggccatttaaaaaaacatgcttttatacttttgaaacatgtgcacata 244
|||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||
Sbjct: 342 cacagcatcttaggccattttaaaaaacatgcttttatacttctgaaatatgtgcacata 283
Query: 245 tcagtaatt-aaaaaaaaaacaaaaacaaaaccaagtagatggagaaacactttccagac 303
||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 282 tcagtaatttaaaaaaaaaacaaa--caaaaccaagtagatggagaaacactttccagac 225
Query: 304 ttgttctttagtctgaatgg 323
||||||||||||||||||||
Sbjct: 224 ttgttctttagtctgaatgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_p10.g1 MSMg01no288_p10.g1 CHROMAT_FILE:
MSMg01no288_p10.g1 PHD_FILE: MSMg01no288_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:11 2005
(294 letters)
>mm_chr18_77087970_77088663
Length = 694
Score = 567 bits (293), Expect = e-166
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 1 agaacagtcattaacattcagttttaagtgaatgttaacagtaaataaagaaatctcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaacagtcattaacattcagttttaagtgaatgttaacagtaaataaagaaatctcttg 260
Query: 61 attgtaatagtagtaacaaagcaataattacccagtaggtggtcatcagtaatgataaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtaatagtagtaacaaagcaataattacccagtaggtggtcatcagtaatgataaat 320
Query: 121 gtgtcattattactgtgtgaatctgggaactcgcttttggaaactacttcagacttttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtcattattactgtgtgaatctgggaactcgcttttggaaactacttcagacttttta 380
Query: 181 gcagcatggctggttacaaagcatttcttagcctgcaaaagccatataattttatacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagcatggctggttacaaagcatttcttagcctgcaaaagccatataattttatacaca 440
Query: 241 atttaggtgaaaataaatttaaatctgtatattacatttttaatttcaagtta 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttaggtgaaaataaatttaaatctgtatattacatttttaatttcaagtta 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
