Query= MSMg01no292_b08.b1 MSMg01no292_b08.b1 CHROMAT_FILE:
MSMg01no292_b08.b1 PHD_FILE: MSMg01no292_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:03 2005
(270 letters)
>mm_chr18_70123979_70124646
Length = 668
Score = 460 bits (238), Expect = e-134
Identities = 256/262 (97%), Gaps = 2/262 (0%)
Strand = Plus / Plus
Query: 7 gaattcagcattcatgctgaagctcaacagtccatgtctcttgcttgtgtttgggaccca 66
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcagcattcatgttgaagctcgacagtccatgtctcttgcttgtgtttgggaccca 266
Query: 67 acttgagtaagtacaccgatttgtttggggggaatatccaaacagcttccacataattgt 126
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acttgagtaagta-ag-gatttgtttggggggaatatccaaacagcttccacataattgt 324
Query: 127 ctaatcagagtacatttttattccaatgaaggctgtaagtgtacgactgtgttttcaact 186
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 ctaatcagagtacatttttattccaatgaaggctgtcagtgtacgactgtgttttcaact 384
Query: 187 gcttagttgtgtgtgagatactgaaaactatcacttttctcagtctcatacttgacctat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcttagttgtgtgtgagatactgaaaactatcacttttctcagtctcatacttgacctat 444
Query: 247 ggtatgagcctgcattcatgtg 268
||||||||||||||||||||||
Sbjct: 445 ggtatgagcctgcattcatgtg 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 668
Length adjustment: 9
Effective length of query: 261
Effective length of database: 659
Effective search space: 171999
Effective search space used: 171999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no292_b08.g1 MSMg01no292_b08.g1 CHROMAT_FILE:
MSMg01no292_b08.g1 PHD_FILE: MSMg01no292_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:03 2005
(288 letters)
>mm_chr18_70326153_70326840
Length = 688
Score = 516 bits (267), Expect = e-151
Identities = 282/287 (98%)
Strand = Plus / Minus
Query: 1 tctccccagctgtaggttcttaatgctcctcctgaaatgaatgaccagatggctgagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tctccccagctgtaggttcttaatgctcctcctgaaatgaatgaccagatggctgagtgg 428
Query: 61 gcaaatttgatagacatctaatgcaaaggaaaactcacgttctccatgggacttttgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gcaaatttgatagacatctaatgcaaaggaaaactcacgttctccatgggacttttgtgt 368
Query: 121 atgaataagaatgagtgataaaatgtcatagcattcagaggttagcgttgacagcctggc 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atggataagaatgagtgataaaatgtcatagcattcagaggttagcgttgacagcctggc 308
Query: 181 tttatgacttattaaggataaggaaaacagcatttacaaaatagagaaagtaatttgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tttatgacttattaaggataaggaaaacagcatttacaaaatagagaaagtaatttgaat 248
Query: 241 atatgctcatgtagaggcacacacaagcagatcttttcttccttgtg 287
|| ||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 247 gtaggctcaagtagaggcacacacaagcagatcgtttcttccttgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
