CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACATAATACCTCATCTCTCATTGCATGGTGGTGTAATCAAATAT
ACATTAAAGGATGGCTTTTAAGAACACAAGGGTTGGCATCAAATGCTGCT
GAGAAAGCTCTTCTCAACTGTGAAATATGCTATTGAATTAGCAGCAAATG
AATTATTTAGATAAGAATTGTACTTTGAACATTGAAGGAGCATTACTTCA
CTCTCTACAGTTAGCCTTTCTTGGAGAATTTGTTCTATTTAGTTTCTAAT
TCATCAGTCCTCCATCAAGTCTAATGTACTGCAAACAATAAAAATAATAT
AAGGAAACAAGATGACTCAGGAAATAAAGAAGCATTGCTCATACATTGTC
TCTTTTCCAAAATACATCACTGTTATGTTCATTGACATGCATGATATTGA
ACACAACTAGAATGATAAGCATCTTCTCTAGACTATGATTCTAAATCCTG
AAGAAGCCTCAAGTCAGGCTTTCTTCTATAAGACAGGGAGAGAATGAAAG
AGCAAACAGATGCTGTAGTGGGAGCACAGTGCATCAAAGACTCATTGTCT
TCACTTGGTGTCTGCATCCTTCACTGGGACACATTATACAAGGCAAGGAC
AAAGGAACAAAAGTATGGATTGCGATGCAGCAATATGGGCCCCCTATAAG
AGTATTTGTTCCCCCTTAGTGCCTTACCGTTATCCCTAAATTAACCCAAA
CTTTTATTTTAA

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGATTTTTATCAT
GAGTGGGTTTTGGATTTGTCAAATGCTTTCTCCGCATCTAAGGAGATGAT
CATGTGGTTTTTGTCTTTGAGTTTGTTTATATAGTGGATTACTTTAATGG
ATTTCCATATATTGAACCATGCCTGCATCCCTGGAAAAAAACCTACTTGG
TCAGGATGGATGATTGTTTTGATGTGCTCTTGCATTCAGCTAGCAACGAA
CTTTATTGAGGATCTTTGCATCTTTATTTTTTCCGGACATGACACCCGAC
TTTCCTCCCTTATTTTTTTTTTTTTCCCCCCCCCCCCCCCGGAGACCGTT
TTAAAAACAGATAGTTTTCCCCCCCCCCGAACAAAAAATAATAAAATACT
TTCCCTTCATCTTCTCTCCACACCCCTCTCTTCCTCTTTTACCATCTTAA
TCCCCTCCATCTTTCCATCTCTACTCCCTACCCTCTCACACTTTCTTCTC
TCCCCCACACACATTCATTCTCCCCCCCCCCTCTTTCTCTCTTCCCCCTC
TTCTCTCCTCCCTTTTTTTCTCCATCCCCTTTTTTCCCCCTCCTCCTTTC
ATCGCTTTTATTGCCTCCTTTTTCTTTCCCTTTTTTTCTACCCCCTTTCC
CCTCTCCTTTCTCCCCTTGTTCCCCACTTCCACCCCCTTCTTTTCTTTTG
CCTTCTCTTTTCCGGGCCTCTCTACTCCATCTCCGTCATCATCTGCTTCC
GCTTCTTTCTGGTCACCCCAN

Query= MSMg01no292_j02.b1 MSMg01no292_j02.b1 CHROMAT_FILE:
MSMg01no292_j02.b1 PHD_FILE: MSMg01no292_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:40 2005
         (559 letters)



>mm_chr18_72444457_72445415
          Length = 959

 Score = 1058 bits (547), Expect = 0.0
 Identities = 553/555 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccacataatacctcatctctcattgcatggtggtgtaatcaaatatacattaaag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacataatacctcatctctcattgcatggtggtgtaatcaaatatacattaaag 264

                                                                       
Query: 65  gatggcttttaagaacacaagggttggcatcaaatgctgctgagaaagctcttctcaact 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatggcttttaagaacacaagggttggcatcaaatgctgctgagaaagctcttctcaact 324

                                                                       
Query: 125 gtgaaatatgctattgaattagcagcaaatgaattatttagataagaattgtactttgaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgaaatatgctattgaattagcagcaaatgaattatttagataagaattgtactttgaa 384

                                                                       
Query: 185 cattgaaggagcattacttcactctctacagttagcctttcttggagaatttgttctatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattgaaggagcattacttcactctctacagttagcctttcttggagaatttgttctatt 444

                                                                       
Query: 245 tagtttctaattcatcagtcctccatcaagtctaatgtactgcaaacaataaaaataata 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagtttctaattcatcagtcctccatcaagtctaatgtactgcaaacaataaaaataata 504

                                                                       
Query: 305 taaggaaacaagatgactcaggaaataaagaagcattgctcatacattgtctcttttcca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaggaaacaagatgactcaggaaataaagaagcattgctcatacattgtctcttttcca 564

                                                                       
Query: 365 aaatacatcactgttatgttcattgacatgcatgatattgaacacaactagaatgataag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaatacatcactgttatgttcattgacatgcatgatattgaacacaactagaatgataag 624

                                                                       
Query: 425 catcttctctagactatgattctaaatcctgaagaagcctcaagtcaggctttcttctat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 catcttctctagactatgattctaaatcctgaagaagcctcaagtcaggctttcttctat 684

                                                                       
Query: 485 aagacagggagagaatgaaagagcaaacagatgctgtagtgggagcacagtgcatcaaag 544
           ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 685 aagacagggagagaatgaaagagcacacagatgctgtagtgggagcagagtgcatcaaag 744

                          
Query: 545 actcattgtcttcac 559
           |||||||||||||||
Sbjct: 745 actcattgtcttcac 759


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space:   521001
Effective search space used:   521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)