Query= MSMg01no293_j17.b1 MSMg01no293_j17.b1 CHROMAT_FILE:
MSMg01no293_j17.b1 PHD_FILE: MSMg01no293_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:04 2005
(708 letters)
>mm_chr18_51752393_51753501
Length = 1109
Score = 1317 bits (681), Expect = 0.0
Identities = 699/705 (99%), Gaps = 1/705 (0%)
Strand = Plus / Plus
Query: 5 gaattctgctcccacaac-caattctttcagatgtagtcattagtcacatacttagatat 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctcccacaaagcaattctttcagatgtagtcattagtcacatacttagatat 264
Query: 64 gatctatcaatgagatttggagaaactatgggactgacattgttctaatgcatgctactc 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 gatctatcaatgagatttggagaaactatgggactgacattgttataatgcatgctactc 324
Query: 124 cataaccctttttgattacattatgccaactaaaatatattaaaagattctgataaaatc 183
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cataacccattttgattacattatgccaactaaaatatattaaaagattctgataaaatc 384
Query: 184 agattaaaattgacatggtctgtcagttacataaaatcaactccccatttttattttaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agattaaaattgacatggtctgtcagttacataaaatcaactccccatttttattttaac 444
Query: 244 tatcaaaacttatgaacatctataatgagtcataaaatgtcagctctttgttagcaggtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatcaaaacttatgaacatctataatgagtcataaaatgtcagctctttgttagcaggtc 504
Query: 304 tggtatggtggtacactattctgtaagaggtgtgcacacttttacttcaagaaaatcctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggtatggtggtacactattctgtaagaggtgtgcacacttttacttcaagaaaatcctt 564
Query: 364 cataaaaactacttaggacagggcctgacatataactggtcaaataactgttcttgcgtc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cataaaaactacttaggacagggcctgacatataactggtcaaataactgttcttgcgtc 624
Query: 424 tccatgtcttagtctctcttctctttctctcttcatctctcatgcctccactactcctca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccatgtcttagtctctcttctctttctctcttcatctctcatgcctccactactcctca 684
Query: 484 tttctcatgtatccctaggagtgtaatattcttctttatctttctgcctttcaaactaaa 543
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 685 tttctcatgtatccctaggagtgtaatattcttcttcatctttctgcctttcaaactaaa 744
Query: 544 tttcaaagacccatcttcaacattcaaaaaacaaggtaagctgcccctcaacataattag 603
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttcaaagactcatcttcaacattcaaaaaacaaggtaagctgcccctcaacataattag 804
Query: 604 cttttcaaactctttagaaattcagtttcagaatatgcttaaaagcagaatggagtaatg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cttttcaaactctttagaaattcagtttcagaatatgcttaaaagcagaatggagtaatg 864
Query: 664 tcaacaatttcaattcatatatatggttttgaattttctttgttt 708
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tcaacaatttcaattcatatatatggttttgaattttctttgttt 909
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1109
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1099
Effective search space: 767102
Effective search space used: 767102
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no293_j17.g1 MSMg01no293_j17.g1 CHROMAT_FILE:
MSMg01no293_j17.g1 PHD_FILE: MSMg01no293_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:04 2005
(295 letters)
>mm_chr18_51909015_51909709
Length = 695
Score = 567 bits (293), Expect = e-166
Identities = 293/293 (100%)
Strand = Plus / Minus
Query: 1 acttgactccttgttcttccggaatgtcaggtttaggagagaagcaactgttccatttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 acttgactccttgttcttccggaatgtcaggtttaggagagaagcaactgttccatttct 434
Query: 61 cttttacttatgaagactttcttcatagggatttaaaaatgtattcttatggaaaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cttttacttatgaagactttcttcatagggatttaaaaatgtattcttatggaaaataaa 374
Query: 121 aagtgatcacttttttcccttactatgagaataaatgatgacatgctggttcatccccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aagtgatcacttttttcccttactatgagaataaatgatgacatgctggttcatccccga 314
Query: 181 gtgtgccagcctaaagtaggatgaatgatacttagaatataattttatcctggcctttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtgtgccagcctaaagtaggatgaatgatacttagaatataattttatcctggcctttat 254
Query: 241 cagttttcttggaaatacaaattttagtggttagctaatcttcattcgccata 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cagttttcttggaaatacaaattttagtggttagctaatcttcattcgccata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
