Query= MSMg01no293_o20.b1 MSMg01no293_o20.b1 CHROMAT_FILE:
MSMg01no293_o20.b1 PHD_FILE: MSMg01no293_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:28 2005
(326 letters)
>mm_chr18_28186086_28186811
Length = 726
Score = 584 bits (302), Expect = e-171
Identities = 317/322 (98%)
Strand = Plus / Minus
Query: 4 ggaattcacttctggcatgctctgcacaaatacataagcaatgtattatcagtgccctca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggaattcacttctggcatgctctgcacaaatacataagcaatgtattatcagtgccctca 466
Query: 64 atgacaggactgtccagatgggattcaattcaaaacccaattgtcttttcctctttgtac 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atgacaggactgtccagatgggattcaattcaaaacccaattgtcttttcctctttgtag 406
Query: 124 acttataattggaatactgttgatcagattctgcttttaataaacatggcaaagcagaca 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 acttataattggaatgctgttgatcagattctgcttttaataaacatggcaaagcagaca 346
Query: 184 ggattttcctgaaacaatttatttgatagaaggcagtggaacatcatatgacagaaatga 243
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 345 ggattttcctgaaacaatttatttgatagaagacagtggaacatcatatgacagaaatga 286
Query: 244 tagaataagagtggatgctacagcagcccaagggaaagtatgttacagagtcctcgagtg 303
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 285 tagaataagagtggatgctacagcagcccaagggaaagtatgttgcagaatcctcgagtg 226
Query: 304 cacacagcaagaggtaggggaa 325
||||||||||||||||||||||
Sbjct: 225 cacacagcaagaggtaggggaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_o20.g1 MSMg01no293_o20.g1 CHROMAT_FILE:
MSMg01no293_o20.g1 PHD_FILE: MSMg01no293_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:28 2005
(223 letters)
>mm_chr2_48130970_48131590
Length = 621
Score = 335 bits (173), Expect = 2e-96
Identities = 191/200 (95%), Gaps = 5/200 (2%)
Strand = Plus / Minus
Query: 1 actatatacaagtatagaactctcaaaggatatgttctttgaagagatatcatttggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 actatatacaagtatagaactctcaaaggatatgttctttgaagagatatcatttggagt 241
Query: 61 gactagcctttattcctggttctctctcttttttttttttttttttagnataccttcaag 120
|||||||||||||||||||||||| |||||||||||||||| || | |||||||||
Sbjct: 240 gactagcctttattcctggttctc-----ttttttttttttttttaagtacaccttcaag 186
Query: 121 actatattagttagggttctccagaagaactgaacatataaacaatatgtatgtatatat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 185 actatattagttagggttctccagaagaactgaacatataaacaatatgtatatatatat 126
Query: 181 atatatatatatatatatat 200
||||||||||||||||||||
Sbjct: 125 atatatatatatatatatat 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 621
Length adjustment: 9
Effective length of query: 214
Effective length of database: 612
Effective search space: 130968
Effective search space used: 130968
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
