Query= MSMg01no294_g05.b1 MSMg01no294_g05.b1 CHROMAT_FILE:
MSMg01no294_g05.b1 PHD_FILE: MSMg01no294_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:04 2005
(317 letters)
>mm_chr18_10181032_10181748
Length = 717
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%)
Strand = Plus / Plus
Query: 5 gaattcacttccgatctgggatcccgcagcaggttgtcgattttttcaaaccgagtctca 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttccgatttgggatcccgcagcaggttgtcgattttttcaaaccgagtctca 264
Query: 65 aaactgtccccacccgacatgatgctgctacttgtgacgataccttcttgcccgcagcgg 124
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaactgtccccagtcgacatgatgctgctacttgtgacgataccttcttgcccgcagcgg 324
Query: 125 aaagcaagttcaaccaacttcctccgcggtgggtttgtagccgcagggcagaggagccgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagcaagttcaaccaacttcctccgcggtgggtttgtagccgcagggcagaggagccgg 384
Query: 185 aacctcggggtcaccaggtgcgcccggttccccctcgtccccctcactgaggggacctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacctcggggtcaccaggtgcgcccggttccccctcgtccccctcactgaggggacctct 444
Query: 245 gctctccagaccccaggctcggtgtgacagcgacccgcagccgctcggacacccaaagtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctctccagaccccaggctcggtgtgacagcgacccgcagccgctcggacacccaaagtc 504
Query: 305 gcatcccacccg 316
||||||||||||
Sbjct: 505 gcatcccacccg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_g05.g1 MSMg01no294_g05.g1 CHROMAT_FILE:
MSMg01no294_g05.g1 PHD_FILE: MSMg01no294_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:04 2005
(284 letters)
>mm_chr18_10354988_10355671
Length = 684
Score = 379 bits (196), Expect = e-109
Identities = 254/284 (89%), Gaps = 18/284 (6%)
Strand = Plus / Minus
Query: 1 tgttggtaacacttgaacataagtaagtttcatcctcttggtttccaccgagctttcgag 60
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||
Sbjct: 626 tgttggtaacacttgaacataagtaagtttcatcctcttggcttccacagagctttcaag 567
Query: 61 aaaagtaaaacacaagacctgacttcgcactgttacagggaaggcaggtgagtcacagag 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 566 aaaagtaaaacacaagacctgacttcacactgttacagggaaggcaggtgagtcacagag 507
Query: 121 ccctgaggagttcat-gggtatgataggctataggacggcaacatgtcacacagcatggt 179
||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 506 ccctgaggagttcatggggtatg-----------------aacatgccacacagcatggt 464
Query: 180 atgtgctgacaaggagctgaattccagctatgtccagtttgagagacattatgatattca 239
|||||||||| || |||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 463 atgtgctgacgagaagctgaattccagctatgtccactttgagagacattatgaaattca 404
Query: 240 ggcactgtataattcttggatggaggagtcttcacaaagatcta 283
||||| | | ||||||||||||||||||||||||||||||||||
Sbjct: 403 ggcacaggaaaattcttggatggaggagtcttcacaaagatcta 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
