Query= MSMg01no294_i19.b1 MSMg01no294_i19.b1 CHROMAT_FILE:
MSMg01no294_i19.b1 PHD_FILE: MSMg01no294_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:15 2005
(368 letters)
>mm_chr18_86580925_86581692
Length = 768
Score = 673 bits (348), Expect = 0.0
Identities = 363/368 (98%), Gaps = 2/368 (0%)
Strand = Plus / Plus
Query: 1 tagatccctcagctcaagagagggatattgtccaatctcctagagagaa-tttaacagca 59
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 201 tagatccctcagctcaagagagggatattgtccaatctcctagag-gaggtttaacagca 259
Query: 60 gaaatgagattggtattaatgtatagaaagtagacctgatcagctaagaggaaaccatgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaaatgagattggtattaatgtatagaaagtagacctgatcagctaagaggaaaccatgc 319
Query: 120 ctcaacaggttgtgagaacacctctgcgtccaaaccatcattaagtagctcacatttagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctcaacaggttgtgagaacacctctgcgtccaaaccatcattaagtagctcacatttagc 379
Query: 180 ctccattttaattgttaagatatgtagcaacaatttaaaaacacaagaaatttaaccaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctccattttaattgttaagatatgtagcaacaatttaaaaacacaagaaatttaaccaaa 439
Query: 240 gtaaaatatagaacaaaggcatttgtaatctatttggcacatcttatgtccagggatttg 299
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 440 gtaaaatgtagaacaaaggcatttgtaatatatttggcacatcttatgtccagggatttg 499
Query: 300 tatagttgggagaagttactagtgtaatcgttcccataatccattgatgaacattaagtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tatagttgggagaagttactagtgtaatcgttcccataatccattgatgaacattaagtt 559
Query: 360 tattattg 367
||||||||
Sbjct: 560 tattattg 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_i19.g1 MSMg01no294_i19.g1 CHROMAT_FILE:
MSMg01no294_i19.g1 PHD_FILE: MSMg01no294_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:15 2005
(293 letters)
>mm_chr18_86745137_86745828
Length = 692
Score = 543 bits (281), Expect = e-159
Identities = 290/293 (98%), Gaps = 1/293 (0%)
Strand = Plus / Minus
Query: 1 ttaagaaagtaaaactaagagtctgtgactagaacatagaaggtgagatctttaacaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttaagaaagtaaaactaagagtctgtgactagaacatagaaggtgagatctttaacaaac 433
Query: 61 taaatccagaagataaatgatgaatattcacagataaccttgttatagcatctctgtact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 taaatccagaagataaatgatgaatattcacagataaccttgttatagcatctctgtact 373
Query: 121 tgtataacccagactcacagctctgtggttgggcaagagagtgtttgtctatgacaatct 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgtataacccaggctcacagctctgtggttgggcaagagagtgtttgtctatgacaatct 313
Query: 181 ggagtaatctctcacagtgttccccttcagggatagactagggcagaatatgtgttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 312 ggagtaatctctcacagtgttccccttcagggatagactagggcagaatgtgtgttaaga 253
Query: 241 gataacaggatatagaaattttagcaaaaggtgttgagtatggttcctagaat 293
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 252 gataacaggatatagaaa-tttagcaaaaggtgttgagtatggttcctagaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
