Query= MSMg01no296_n05.b1 MSMg01no296_n05.b1 CHROMAT_FILE:
MSMg01no296_n05.b1 PHD_FILE: MSMg01no296_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:07 2005
(317 letters)
>mm_chr18_3855027_3855743
Length = 717
Score = 600 bits (310), Expect = e-176
Identities = 313/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 5 gaattctagaaaag-atctaagcatgaggcttctacaagtgagtttgctcatttcttctg 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctagaaaagaatctaagcatgaggcttctacaagtgagtttgctcatttcttctg 263
Query: 64 ctgtatgagtagccagtaaacaggctctcaccaggaggaccagggcctttccagacacca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgtatgagtagccagtaaacaggctctcaccaggaggaccagggcctttccagacacca 323
Query: 124 gagttcctgaccttcacattaggtttcccaccctccagaactctgatcaatggagttgtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagttcctgaccttcacattaggtttcccaccctccagaactctgatcaatggagttgtc 383
Query: 184 cagtctgaagagactaagacatctagacaagcatataagtgattagaaaaaggcgaagag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagtctgaagagactaagacatctagacaagcatataagtgattagaaaaaggcgaagag 443
Query: 244 cttcattagtgggaacataagctagagagggttgagcaacgacagcaatgttatcagtgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttcattagtgggaacataagctagagagggttgagcaacgacagcaatgttatcagtgt 503
Query: 304 ttctaatcaaacac 317
||||||||||||||
Sbjct: 504 ttctaatcaaacac 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_n05.g1 MSMg01no296_n05.g1 CHROMAT_FILE:
MSMg01no296_n05.g1 PHD_FILE: MSMg01no296_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:07 2005
(282 letters)
>mm_chr18_4033003_4033684
Length = 682
Score = 478 bits (247), Expect = e-139
Identities = 271/279 (97%)
Strand = Plus / Minus
Query: 1 tcagggtctggcattcattatttagaagccaactctcatatgggtacataaaacacatta 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 479 tcagggtctggcattcattatttagaagccaactcttatatgggtacataaaacacatta 420
Query: 61 ttaattcctagcttagtattggcttctctgactctgtcctttgagtcagaacccagtggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 419 ttaattcctagcttagtattggcttctctgactctgtcctttgagtcagaatccagtggt 360
Query: 121 tagtccatagaatttctggcatcagaagcttggtctccatctcccacccggactgaagac 180
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 359 tagtccatagaatttctggcatcagaagcttggtctccatctcccactgggattgaagac 300
Query: 181 tcaaacaaccaaacttgggtttgaacgagttttagaggttggaacccaagtcctcttgtt 240
||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 299 tcaaacaaccaaacttgggtttgaacgagttctagaggttggaactcaggtcctcttgtt 240
Query: 241 tttgtgggaagcattttatatattgaaccaattccccag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tttgtgggaagcattttatatattgaaccaattccccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
