TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGA
ATTCACTTTGAGTTTCCTAGAACAGGTGAAGACGCTTGCAAGGCCACCTC
CAGTTACCGTCAGGAAACCCTGGATGGGATTTCTTACTCATTCCCAGCAC
TGCACAAGAATACCCACATGCAAACCACCTAATCTACCAATATTAGTAAT
GCATTTACTTCCTGATTAAAGTGCTTTAAATGTTCAGAGCAAACACATTT
GTTTATTTCTTTCTTAATTTGCCAGGCCACTTTGCTGGCAGAGTCCGAAA
CAGAGGAATCCAAGATGTATTGATTACTTTCTCCATGACTATTTAATCGG
TTAAAGTGTGAGCTACGTGCAAGGACTATGATGCTGGTTACATTTTAATA
AATGGCCTTTGTGGCCGATCAATACTTCTCAGCACCCCCTCCCTCTAAAT
ACATAAATAAATAAGTAAATATTCTGTTCCCTCTTATGTTAATAGGGAAA
AAATCTTTTTACCATCATCATCTATCGTGGCAAACAAGAATATGAAAAGT
GTTAATGAAATGACCAACTGTCTATAAAATAAAAATCTTGCAAGACAGCC
TCCTTTCTTCTCTTAATTTAATGAAACAAAATAGAAAATTGCACTGGTGC
CCATCCGGCGTGAAATGATGTTAACAAGCAGAAAACAAATGCTGTAATGA
AGGACTTCTAGGATGTACTATGTATAGTN

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCTCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTCGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTTACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAA
GTGGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTC
CTAAACACATGAAACTCAAGAAAAATGAAG

Query= MSMg01no297_l23.b1 MSMg01no297_l23.b1 CHROMAT_FILE:
MSMg01no297_l23.b1 PHD_FILE: MSMg01no297_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:15 2005
         (657 letters)



>mm_chr18_27774876_27775931
          Length = 1056

 Score = 1230 bits (636), Expect = 0.0
 Identities = 651/656 (99%), Gaps = 1/656 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggtgaagacgcttgcaaggccacctccagttaccgtcaggaaaccctggatgggattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtgaagacgcttgcaaggccacctccagttaccgtcaggaaaccctggatgggattt 260

                                                                       
Query: 61  cttactcattcccagcactgcacaagaatacccacatgcaaaccacctaatctaccaata 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 cttactcattcccagcactgcacaagaatgcccacatgcaaaccacctaatctaccaata 320

                                                                       
Query: 121 ttagtaatgcatttacttcctgattaaagtgctttaaatgttcagagcaaacacatttgt 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagtaatgcatttacttcctgattaaagtgctttaaatgttcagagcaaacacatttgt 380

                                                                       
Query: 181 ttatttctttcttaatttgccaggccactttgctggcagagtccgaaacagaggaatcca 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 ttatttctttcttaatttgccaggccactttgctggcagagtctgaaacagaggaatcca 440

                                                                       
Query: 241 agatgtattgattactttctccatgactatttaatcggttaaagtgtgagctacgtgcaa 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 agatgtattgattactttctccatgactatttaatcggttaaagtgtgagctacttgcaa 500

                                                                       
Query: 301 ggactatgatgctggttacattttaataaatggcctttgtggccgatcaatacttctcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggactatgatgctggttacattttaataaatggcctttgtggccgatcaatacttctcag 560

                                                                       
Query: 361 caccccctccctctaaatacataaataaataagtaaatattctgttccctcttatgttaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caccccctccctctaaatacataaataaataagtaaatattctgttccctcttatgttaa 620

                                                                       
Query: 421 tagggaaaaaatctttttaccatcatcatctatcgtggcaaacaagaatatgaaaagtgt 480
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagggaaaaa-tctttttaccatcatcatctatcgtggcaaacaagaatatgaaaagtgt 679

                                                                       
Query: 481 taatgaaatgaccaactgtctataaaataaaaatcttgcaagacagcctcctttcttctc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taatgaaatgaccaactgtctataaaataaaaatcttgcaagacagcctcctttcttctc 739

                                                                       
Query: 541 ttaatttaatgaaacaaaatagaaaattgcactggtgcccatccggcgtgaaatgatgtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttaatttaatgaaacaaaatagaaaattgcactggtgcccatccggcgtgaaatgatgtt 799

                                                                   
Query: 601 aacaagcagaaaacaaatgctgtaatgaaggacttctaggatgtactatgtatagt 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aacaagcagaaaacaaatgctgtaatgaaggacttctaggatgtactatgtatagt 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space:   676762
Effective search space used:   676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)