Query= MSMg01no303_h09.b1 MSMg01no303_h09.b1 CHROMAT_FILE:
MSMg01no303_h09.b1 PHD_FILE: MSMg01no303_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:23 2005
(573 letters)
>mm_chr18_51394010_51394982
Length = 973
Score = 992 bits (513), Expect = 0.0
Identities = 552/565 (97%)
Strand = Plus / Minus
Query: 9 ttataagccactgaatatgggtactggaaattaaacctgtctttgcaagagcagtaaata 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 ttataagccactgaatatgggtactggaaattaaacctgtctttgcaagagcagtaaata 914
Query: 69 tccttaatcactgggcatgactcttgtttctagcttcttgccttgagttcctactttaac 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 913 tccttaatcactgggcatgactcttgtttctagcttcttgccttgagttcctactttgac 854
Query: 129 ttactgtaattgtgacctggaagtataaaccaaataaattctctctttccccatattgca 188
|||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||
Sbjct: 853 ttactgtaattgtgacctggaagtataaaccaaataaattctttcttcccccacattgca 794
Query: 189 tttgggtaatattttataactctaggagagaaaacaaccagagcatatctaaagtgagta 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tttgggtaatattttataactctaggagagaaaacaaccagagcatatctaaagtgagta 734
Query: 249 atttttaagagagaatatcttctcttatggaaaagtagcttatgaaaaaacctgatcttt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 atttttaagagagaatatcttctcttatggaaaagtagcttatgaaaaaacctgatcttt 674
Query: 309 ctcggatgaaacaccagtctcttccacatatggaggctccctacgactaattttcttcac 368
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 673 ctcggaagaaacaccagtctcttccacatatggaggcttcctacgactaattttcttcac 614
Query: 369 agaatactgaggtcagcaagcataaaccttcctttggattccttcctgattttatggaaa 428
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 613 agaatactgaggtcagcaagcagaaaccttcctttggattccttcctgattttatggaaa 554
Query: 429 tatgacagggaccaaaggcctactttatactccagaaagtacaatgagaaggctactcat 488
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 553 tatgacagggaccaagggcctactttacactccagaaagtacaatgagaaggctactcat 494
Query: 489 agttttcctgtcaaatataaaacagaacctgcatcatggccaaaaaccaggatctctaca 548
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 493 agttttcctgtcaaatataaaacagaacctgcatcatggccaaaaaccaggttatctaca 434
Query: 549 agttcatagaccttgtaaccatcaa 573
| |||||||||||||||| ||||||
Sbjct: 433 acttcatagaccttgtaatcatcaa 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_h09.g1 MSMg01no303_h09.g1 CHROMAT_FILE:
MSMg01no303_h09.g1 PHD_FILE: MSMg01no303_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:23 2005
(559 letters)
>mm_chr18_51270114_51271072
Length = 959
Score = 1013 bits (524), Expect = 0.0
Identities = 551/560 (98%), Gaps = 2/560 (0%)
Strand = Plus / Plus
Query: 1 tctgtggaatacagacattgccttgtaacttagcaacacttctgtcatctctattagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtggaatacagacattgccttgtaacttagcaacacttctgtcatctctattagtgc 260
Query: 61 atttacaaacaccaagctaggttaaaaatgatttaaatcaaaataggtatgtcagaaatg 120
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 atttacaaaca-caagctaggttaaaaatgattttaatcaaaataggtatgtcagaaatg 319
Query: 121 gcaaaccatctttaagtatgcaaagggatattgtgtagcaatctgacagaattagaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcaaaccatctttaagtatgcaaagggatattgtgtagcaatctgacagaattagaacaa 379
Query: 181 agcgctatgaaaagagtagaaatattgaagttaaataaatggttgctattgttatacttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 380 agcgctatgaaaagagtagaaatattgaagttaaataaatggttgctattattatacttt 439
Query: 241 acatattcctatcatttgtatttattgacatgcatacacattgtgattttaaaacattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acatattcctatcatttgtatttattgacatgcatacacattgtgattttaaaacattat 499
Query: 301 ggtgacaattctgtgcttggagaaacaatcatgtacatgtattcactaaaattgtcaaag 360
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 500 ggtgacaattctgtgcttggagaaacaatcatgtacatgtatttattaaaattgtcaaag 559
Query: 361 tgcaatatatatgcacacacatacacaaaggtgactgggtttggaggtcttctatatagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgcaatatatatgcacacacatacacaaaggtgactgggtttggaggtcttctatatagc 619
Query: 421 tttctagagcctctacttagagcttttaatcttttttttttttttacttaagattttcaa 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttctagagcctcaacttagagcttttaatcttttttttttttttacttaagattttcaa 679
Query: 481 gtactaaagatattgggagtatttaagatggaaatttttt-cttctcataccttatcgtc 539
|||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 680 gtactagagatatagggagtatttaagatggaaatttttttcttctcataccttatcgtc 739
Query: 540 atcagatattgtctcgtaaa 559
||||||||||||||||||||
Sbjct: 740 atcagatattgtctcgtaaa 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
