Query= MSMg01no305_d05.b1 MSMg01no305_d05.b1 CHROMAT_FILE:
MSMg01no305_d05.b1 PHD_FILE: MSMg01no305_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:50 2005
(412 letters)
>mm_chr18_50484494_50485305
Length = 812
Score = 774 bits (400), Expect = 0.0
Identities = 406/408 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttaaagtgtgctctcagaataatattttgctttgtaaaaaagaaagcaaattt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggaattcttaaagtgtgctctcagaataatattttgctttgtaaaaaagaaagcaaattt 552
Query: 64 tgtaacattagccaaatcagacggaaccagtcctaagttcatcagtttcttgtaaagtga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgtaacattagccaaatcagacggaaccagtcctaagttcatcagtttcttgtaaagtga 492
Query: 124 ctgttatatgttttcctctaaacatctcaaacaaaattaagttgaatctactcattgata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctgttatatgttttcctctaaacatctcaaacaaaattaagttgaatctactcattgata 432
Query: 184 tataaatttttaaacataaaatctgtaatttgtttataatcacatagatctggttattca 243
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 431 tataaatttttaaacataaaatctgtattttgtttataatcacatagatctggttattca 372
Query: 244 tgtgttcatatctatgtatttaaattcctaaagatattagaagttgaccaaaatttcttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgtgttcatatctatgtatttaaattcctaaagatattagaagttgaccaaaatttcttt 312
Query: 304 tatttcttaagagtaattgaggcaatagtaaaaactctgttcagttcaatacacttaata 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 311 tatttcttaagagtaattgaggcaatagtaaaaactctgttcagttcaatacacttaaaa 252
Query: 364 gtatggaagttatatcaaaaatttcagtgtcttgttttggtagtgact 411
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gtatggaagttatatcaaaaatttcagtgtcttgttttggtagtgact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_d05.g1 MSMg01no305_d05.g1 CHROMAT_FILE:
MSMg01no305_d05.g1 PHD_FILE: MSMg01no305_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:50 2005
(422 letters)
>mm_chr18_50320940_50321761
Length = 822
Score = 708 bits (366), Expect = 0.0
Identities = 380/390 (97%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 1 tttagaaaaattcagactctgccccccccccccc---------gccccaaatgatcagca 51
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 192 tttagaaaaattcagactctgccccccccccccccccccccccgccccaaatgatcagca 251
Query: 52 agatattgccagagactctgggctgtgttgtttatctgttagctgaactcctaccatgca 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agatattgccagagactctgggctgtgttgtttatctgttagctgaactcctaccatgca 311
Query: 112 gacacccagggataactgcttcttactgctcttgttttggatgtacagcttattaattga 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gacacccagggataactgcttcttactgctcttgttttggatgtacagcttattaattga 371
Query: 172 atgttaagttcttttgatgcagaggctctttcatgtgtatttattttttgtgatgctgag 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atgttaagttcttttgatgcagaggctctttcatgtgtatttattttttgtgatgctgag 431
Query: 232 ggtggaactcaggaccgtgggcatgctgggaaagctctgtacacacagcacagcccggtt 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggtggaactcaggaccgtgggcatgctgggaaagctctgtacacacagcacagcccggtt 491
Query: 292 tatgtggcatccttttaaaaatacagtgttttaaattatttctttgaaaatgctgtagat 351
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 492 tatgtggcatccttttaaaaatacagtgttttaaattaattctttgaaaatgctgtagat 551
Query: 352 gtatgtaatgtattgtgatagtattcacta 381
||||||||||||||||||||||||||||||
Sbjct: 552 gtatgtaatgtattgtgatagtattcacta 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
