Query= MSMg01no305_g10.b1 MSMg01no305_g10.b1 CHROMAT_FILE:
MSMg01no305_g10.b1 PHD_FILE: MSMg01no305_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:17 2005
(424 letters)
>mm_chr18_20445611_20446440
Length = 830
Score = 538 bits (278), Expect = e-157
Identities = 381/418 (91%), Gaps = 16/418 (3%)
Strand = Plus / Plus
Query: 18 ggaattcttttgagagaaaaa-tgtgtttgggaatcagaatgtgctatttaataaaattg 76
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ggaattcttttgagagaaaaaatgtgtttgggaatcagaatgtgctatttaataaaattg 277
Query: 77 ggtgttctgggtatcaccccaactcagtttacttcaaaggggcctcaagtagaggt-aaa 135
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||
Sbjct: 278 ggtgttctgggtatcaccccaactcagtttacttcaaaggggtctcaagtagag-tcaaa 336
Query: 136 ggagtattttgggctatctaagagttc-ttata-ag---gatgcccttcattacaatc-- 188
||||||| |||| ||||||||||| | ||||| || |||| |||||| |||||||
Sbjct: 337 ggagtatcttggaatatctaagagt-cgttatacagatggatgtccttcagtacaatcaa 395
Query: 189 tgtgtactgtttcatttggctcagaagtaggttacagatagcactaagaggatttctctc 248
|||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 396 tgtg-a-tgtttcatttggctcagaagtaggatacagatagccctaagaggatttctctc 453
Query: 249 t--ctggtgtcagtggcacaaattaaaaactacaggactctgtgggcagaaaaataaaga 306
| |||||||||||||||| |||||| | || ||||||||||||||| ||||| ||||
Sbjct: 454 tttctggtgtcagtggcactcattaaacattataggactctgtgggca-aaaaacaaagg 512
Query: 307 catgcaaggaaagagcagtgcagctgaatagccattgaggaaactcaccaacattgcttc 366
|| ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 513 cacgcaaggaaagagcagagcagctgaatagccactgaggaaactcaccaacaatgcttc 572
Query: 367 atatagatgctggacaatacctcatatagatgatgagcaatgcctcatatagatggtg 424
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 573 atatagatgctggacaatacttcatatagatgatgaacaatgcctcatatagatggtg 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 830
Length adjustment: 9
Effective length of query: 415
Effective length of database: 821
Effective search space: 340715
Effective search space used: 340715
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_g10.g1 MSMg01no305_g10.g1 CHROMAT_FILE:
MSMg01no305_g10.g1 PHD_FILE: MSMg01no305_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:17 2005
(381 letters)
>mm_chr18_20478042_20478823
Length = 782
Score = 708 bits (366), Expect = 0.0
Identities = 378/382 (98%), Gaps = 1/382 (0%)
Strand = Plus / Minus
Query: 1 tgcttaagttaatttccagatttaaatgttgcatataacttttggtgaagtaccaagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tgcttaagttaatttccagatttaaatgttgcatataacttttggtgaagtaccaagata 523
Query: 61 tattaagttgtttttaatctaaaaattgtagtta-ttttttttaaaaaaacactgatatc 119
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 522 tattaagttgtttttaatctaaaaattgtagttattttttttttaaaaaacactgatatc 463
Query: 120 cacatgtcaaagtaatgtgtctgtatatttgtttatcacatggtaaaaggtatatttaaa 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 462 cacatgtcaaagtaatgtgtctgtatatttgtttatgacatggtaaaaggtatatttaaa 403
Query: 180 atttaaatggtttttgcattcattattttgtattgcactgagggtcagttaatgtgagac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atttaaatggtttttgcattcattattttgtattgcactgagggtcagttaatgtgagac 343
Query: 240 tgtacacttaggttttgcgaacatattttcaaataagaggtgttcaacttctaattgaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgtacacttaggttttgcgaacatattttcaaataagaggtgttcaacttctaattgaat 283
Query: 300 ttttcatgataggaaatgctgaaatttatgttcataaccagactttagcactgatcacaa 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 282 ttttcatgataggaaatgctgaaatttatgctcataaccagactttagcactgatcacaa 223
Query: 360 aacatatagtgtacaattaaaa 381
||||||||||||||||||||||
Sbjct: 222 aacatatagtgtacaattaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 782
Length adjustment: 9
Effective length of query: 372
Effective length of database: 773
Effective search space: 287556
Effective search space used: 287556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
