Query= MSMg01no308_d15.b1 MSMg01no308_d15.b1 CHROMAT_FILE:
MSMg01no308_d15.b1 PHD_FILE: MSMg01no308_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:30 2005
(320 letters)
>mm_chr18_38434643_38435363
Length = 721
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctcccgtgaaaccccatcggctttcttcacaggggtaccatcccagacacaga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggaattcctcccgtgaaaccccatcggctttcttcacaggggtaccatcccagacacaga 462
Query: 64 gggccttgtaggcctccagcctagtggtcaagcagaacctgacctggaagaagggccccc 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gggccttgtaggcctcaagcctagtggtcaagcagaacctgacctggaagaagggccccc 402
Query: 124 gagcccggaggaggacctttctgtaaagcgacttctagaagaagagctgtcgagcctgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gagcccggaggaggacctttctgtaaagcgacttctagaagaagagctgtcgagcctgtt 342
Query: 184 ggaccctaatacaggtagggatgccccggggtcaccttggtgctgtctctgtgt-cccgt 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 341 ggaccctaatacaggtagggatgccccggggtcaccttggtgctgtctctgtgtgcccat 282
Query: 243 catcctcccatgcaccccgactgcagagttctgctcctgtccgctgtagagaggggcgtg 302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 281 catcctcccatgcaccccgactgcagagttctgctccagtccgctgtagagaggggcgtg 222
Query: 303 gccagcattttacttgcc 320
||||||||||||||||||
Sbjct: 221 gccagcattttacttgcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_d15.g1 MSMg01no308_d15.g1 CHROMAT_FILE:
MSMg01no308_d15.g1 PHD_FILE: MSMg01no308_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:30 2005
(286 letters)
>mm_chr18_38253613_38254298
Length = 686
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%)
Strand = Plus / Plus
Query: 1 ttctcaggaagttctgggttctcttgccctgtgcatcttcaaggcttggtggggctcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcaggaagttctgggttctcttgccctgtgcatcttcaaggcttggtggggctcctg 260
Query: 61 acagcttctcctcatctgggaacttgccaccattctgctcagtgtctcttttatctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagcttctcctcatctgggaacttgccaccattctgctcagtgtctcttttatctcctt 320
Query: 121 cctgactcaactgtcttttctccctttgtccctctctttgtctatctttccacatccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgactcaactgtcttttctccctttgtccctctctttgtctatctttccacatccttg 380
Query: 181 tctctgatccagctcatgactcagcccacttgggcctctaggcgtgcctctccttccctg 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tctctgatccagctcatgactcagcccatttgggcctctaggcgtgcctctccttccctg 440
Query: 241 tttccctgtcatgcctctgatccatcctgcatataaacccagtg 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttccctgtcatgcctctgatccatcctgcatataaacccagtg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
