Query= MSMg01no308_g12.b1 MSMg01no308_g12.b1 CHROMAT_FILE:
MSMg01no308_g12.b1 PHD_FILE: MSMg01no308_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:43 2005
(522 letters)
>mm_chr18_77177013_77177934
Length = 922
Score = 977 bits (505), Expect = 0.0
Identities = 514/517 (99%)
Strand = Plus / Minus
Query: 6 aattcctggcatgctaacctctaagcatgaaggccgagaacaagtctcttttatacatta 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aattcctggcatgctaacctctaagcatgaaggccgagaacaagtctcttttatacatta 585
Query: 66 aaccaaaccaagcgccaggaaacgttcacttaataggctgtttgctggttttattgggtt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aaccaaaccaagcgccaggaaacgttcacttaataggctgtttgctggttttattgggtt 525
Query: 126 aaatatggctgcctgcgtggcatgacactaatttaaaattcaacttaacaaagagccaac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aaatatggctgcctgcgtggcatgacactaatttaaaattcaacttaacaaagagccaac 465
Query: 186 tttagtgctgacatcccaccgtcccaagcctggctgagggtctgcttctggcccttcagc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tttagtgctgacatcccaccgtcccaagcctggctgagggtctgcttctggcccttcagc 405
Query: 246 tttcaagggtgttagtggtttttgcctttcacagcagtttaccacagagggttggtcaca 305
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 404 tttcaagggtgttagtggtttttgcctttcacagcagttcaccacagagggttggtcaca 345
Query: 306 ttagatgtttcttgcatttcactgcttcaatccctttacatttccccttaaagagttgga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttagatgtttcttgcatttcactgcttcaatccctttacatttccccttaaagagttgga 285
Query: 366 gccttccacctcacaattgggtgatggtgttcactggactgcaaatcccttaaattggta 425
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gccttccatctcagaattgggtgatggtgttcactggactgcaaatcccttaaattggta 225
Query: 426 tctggaatgtgttaattaccaagaatcagctttggcatccacgaggtgggtaaactgagg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tctggaatgtgttaattaccaagaatcagctttggcatccacgaggtgggtaaactgagg 165
Query: 486 cagcagctgatggaggtcagtacttagagccataatg 522
|||||||||||||||||||||||||||||||||||||
Sbjct: 164 cagcagctgatggaggtcagtacttagagccataatg 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_g12.g1 MSMg01no308_g12.g1 CHROMAT_FILE:
MSMg01no308_g12.g1 PHD_FILE: MSMg01no308_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:43 2005
(285 letters)
>mm_chr18_77121823_77122507
Length = 685
Score = 499 bits (258), Expect = e-146
Identities = 276/282 (97%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 1 tttgctcttggccttttgccattgatgccctttccactccaatttaagaaagacattccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgctcttggccttttgccattgatgccctttccactccaatttaagaaagacattccc 260
Query: 61 catttctctaacccttgatgttctgcctcttaaggaactgtattcactgtgtcacagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catttctctaacccttgatgttctgcctcttaaggaactgtattcactgtgtcacagcag 320
Query: 121 agcagtgagcatgacttaaggaacatctagttgcctctataaatgtcttgtgaacctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagtgagcatgacttaaggaacatctagttgcctctataaatgtcttgtgaacctaaa 380
Query: 181 ttgccctttgctgttccaccctacaccctggaactttctaggatccagacaagtgtccca 240
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 381 ttgccctttgctgttccaccctacaccccggaactttctaggatccaggcaagtgtccca 440
Query: 241 gctgtttcttcagctcctggctgccccttatcctcacacccc 282
|||| || |||||||||||||||||||||||||||| ||||
Sbjct: 441 gctgggtcatcagctcctggctgccccttatcctcac-cccc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
